Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z8U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z8U entry

There are 2 chains in PDB entry 4Z8U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 90ILE 421
B
 MSE 1SER 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4Z8U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 99Right-handed alpha
Helix 2
AA2
A
109 115Right-handed alpha
Helix 3
AA3
A
116 120Right-handed 310
Helix 4
AA4
A
121 149Right-handed alpha
Helix 5
AA5
A
165 174Right-handed alpha
Helix 6
AA6
A
174 184Right-handed alpha
Helix 7
AA7
A
191 194Right-handed 310
Helix 8
AA8
A
195 202Right-handed alpha
Helix 9
AA9
A
210 230Right-handed alpha
Helix 10
AB1
A
250 265Right-handed alpha
Helix 11
AB2
A
276 287Right-handed alpha
Helix 12
AB3
A
297 311Right-handed alpha
Helix 13
AB4
A
311 322Right-handed alpha
Helix 14
AB5
A
354 362Right-handed alpha
Helix 15
AB6
A
371 375Right-handed 310
Helix 16
AB7
A
378 387Right-handed alpha
Helix 17
AB8
A
391 405Right-handed alpha
Helix 18
AB9
A
409 420Right-handed alpha
Helix 19
AC1
B
5 39Right-handed alpha
Helix 20
AC2
B
44 50Right-handed alpha
Helix 21
AC3
B
63 77Right-handed alpha
Helix 22
AC4
B
83 95Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4Z8U.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 245first strand
Strand 2
A
154 159parallel
Strand 3
A
267 273parallel
Strand 4
A
326 333parallel
Strand 5
A
339 346anti-parallel
Strand 6
A
349 351anti-parallel
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