Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z8X entry

There are 3 chains in PDB entry 4Z8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 142LYS 608
B
 ALA 142LYS 608
C
 ALA 142LEU 602
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 4Z8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
160 165Right-handed alpha
Helix 2
AA2
A
167 176Right-handed alpha
Helix 3
AA3
A
176 182Right-handed alpha
Helix 4
AA4
A
200 212Right-handed alpha
Helix 5
AA5
A
232 246Right-handed alpha
Helix 6
AA6
A
274 289Right-handed alpha
Helix 7
AA7
A
290 293Right-handed 310
Helix 8
AA8
A
308 313Right-handed 310
Helix 9
AA9
A
327 338Right-handed alpha
Helix 10
AB1
A
349 356Right-handed alpha
Helix 11
AB2
A
365 380Right-handed alpha
Helix 12
AB3
A
385 397Right-handed alpha
Helix 13
AB4
A
408 429Right-handed alpha
Helix 14
AB5
A
462 485Right-handed alpha
Helix 15
AB6
A
486 489Right-handed 310
Helix 16
AB7
A
490 492Right-handed 310
Helix 17
AB8
A
493 510Right-handed alpha
Helix 18
AB9
A
540 569Right-handed alpha
Helix 19
AC1
A
569 584Right-handed alpha
Helix 20
AC2
A
587 598Right-handed alpha
Helix 21
AC3
B
160 165Right-handed alpha
Helix 22
AC4
B
167 176Right-handed alpha
Helix 23
AC5
B
176 182Right-handed alpha
Helix 24
AC6
B
200 212Right-handed alpha
Helix 25
AC7
B
232 246Right-handed alpha
Helix 26
AC8
B
274 289Right-handed alpha
Helix 27
AC9
B
290 293Right-handed 310
Helix 28
AD1
B
308 313Right-handed 310
Helix 29
AD2
B
327 333Right-handed alpha
Helix 30
AD3
B
349 356Right-handed alpha
Helix 31
AD4
B
361 380Right-handed alpha
Helix 32
AD5
B
385 397Right-handed alpha
Helix 33
AD6
B
408 429Right-handed alpha
Helix 34
AD7
B
462 485Right-handed alpha
Helix 35
AD8
B
486 489Right-handed 310
Helix 36
AD9
B
490 492Right-handed 310
Helix 37
AE1
B
493 510Right-handed alpha
Helix 38
AE2
B
540 569Right-handed alpha
Helix 39
AE3
B
569 584Right-handed alpha
Helix 40
AE4
B
587 598Right-handed alpha
Helix 41
AE5
C
160 165Right-handed alpha
Helix 42
AE6
C
167 176Right-handed alpha
Helix 43
AE7
C
176 182Right-handed alpha
Helix 44
AE8
C
200 212Right-handed alpha
Helix 45
AE9
C
231 246Right-handed alpha
Helix 46
AF1
C
274 289Right-handed alpha
Helix 47
AF2
C
290 293Right-handed 310
Helix 48
AF3
C
308 313Right-handed 310
Helix 49
AF4
C
327 338Right-handed alpha
Helix 50
AF5
C
349 356Right-handed alpha
Helix 51
AF6
C
361 380Right-handed alpha
Helix 52
AF7
C
385 397Right-handed alpha
Helix 53
AF8
C
408 427Right-handed alpha
Helix 54
AF9
C
462 485Right-handed alpha
Helix 55
AG1
C
486 489Right-handed 310
Helix 56
AG2
C
490 492Right-handed 310
Helix 57
AG3
C
493 510Right-handed alpha
Helix 58
AG4
C
540 569Right-handed alpha
Helix 59
AG5
C
569 584Right-handed alpha
Helix 60
AG6
C
588 598Right-handed alpha
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There are 6 sheets in PDB entry 4Z8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 220first strand
Strand 2
A
249 254parallel
Strand 3
A
295 301parallel
Strand 4
A
191 194parallel
Strand 5
A
319 322parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 439first strand
Strand 2
A
585 586anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 220first strand
Strand 2
B
249 254parallel
Strand 3
B
295 301parallel
Strand 4
B
191 194parallel
Strand 5
B
319 322parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 439first strand
Strand 2
B
585 586anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 220first strand
Strand 2
C
249 254parallel
Strand 3
C
295 301parallel
Strand 4
C
191 194parallel
Strand 5
C
319 322parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
438 439first strand
Strand 2
C
585 586anti-parallel
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