Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z8Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z8Z entry

There is 1 chain in PDB entry 4Z8Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4Z8Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
22 25Right-handed 310
Helix 3
AA3
A
49 53Right-handed 310
Helix 4
AA4
A
76 79Right-handed 310
Helix 5
AA5
A
106 109Right-handed 310
Helix 6
AA6
A
110 120Right-handed alpha
Helix 7
AA7
A
132 136Right-handed 310
Helix 8
AA8
A
151 177Right-handed alpha
Helix 9
AA9
A
187 200Right-handed alpha
Helix 10
AB1
A
217 222Right-handed alpha
Helix 11
AB2
A
225 235Right-handed alpha
Helix 12
AB3
A
238 247Right-handed alpha
Helix 13
AB4
A
248 250Right-handed 310
Helix 14
AB5
A
251 255Right-handed 310
Helix 15
AB6
A
276 290Right-handed alpha
Helix 16
AB7
A
303 308Right-handed 310
Helix 17
AB8
A
309 321Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4Z8Z.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
63 68anti-parallel
Strand 3
A
81 87anti-parallel
Strand 4
A
122 127anti-parallel
Strand 5
A
94 99parallel
Strand 6
A
181 186parallel
Strand 7
A
205 209parallel
Strand 8
A
264 269parallel
Strand 9
A
294 298parallel
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