Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZAJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZAJ entry

There is 1 chain in PDB entry 4ZAJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4ZAJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
44 52Right-handed alpha
Helix 3
AA3
A
62 72Right-handed alpha
Helix 4
AA4
A
95 110Right-handed alpha
Helix 5
AA5
A
136 156Right-handed alpha
Helix 6
AA6
A
171 184Right-handed alpha
Helix 7
AA7
A
185 189Right-handed 310
Helix 8
AA8
A
196 211Right-handed alpha
Helix 9
AA9
A
212 227Right-handed alpha
Helix 10
AB1
A
232 254Right-handed alpha
Helix 11
AB2
A
262 268Right-handed 310
Helix 12
AB3
A
269 280Right-handed alpha
Helix 13
AB4
A
311 326Right-handed alpha
Helix 14
AB5
A
340 354Right-handed alpha
Helix 15
AB6
A
389 407Right-handed alpha
Helix 16
AB7
A
414 419Right-handed alpha
Helix 17
AB8
A
420 437Right-handed alpha
Helix 18
AB9
A
447 452Right-handed alpha
Helix 19
AC1
A
458 475Right-handed alpha
Helix 20
AC2
A
479 490Right-handed alpha
Helix 21
AC3
A
496 507Right-handed alpha
Helix 22
AC4
A
508 520Right-handed alpha
Helix 23
AC5
A
522 543Right-handed alpha
Helix 24
AC6
A
559 581Right-handed alpha
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There are 5 sheets in PDB entry 4ZAJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
41 43anti-parallel
Strand 3
A
90 94anti-parallel
Strand 4
A
79 83anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
159 164parallel
Strand 3
A
121 125parallel
Strand 4
A
331 337parallel
Strand 5
A
363 369parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
A
289 292anti-parallel
Strand 3
A
301 304anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
444 445parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 548first strand
Strand 2
A
555 558anti-parallel
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