Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZB7 entry

There are 4 chains in PDB entry 4ZB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4VAL 219
B
 GLY 4ALA 217
C
 GLY 4TRP 213
D
 GLY 4TRP 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4ZB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
73 86Right-handed alpha
Helix 3
AA3
A
97 114Right-handed alpha
Helix 4
AA4
A
141 155Right-handed alpha
Helix 5
AA5
A
166 180Right-handed alpha
Helix 6
AA6
A
187 193Right-handed alpha
Helix 7
AA7
A
193 205Right-handed alpha
Helix 8
AA8
A
206 219Right-handed alpha
Helix 9
AA9
B
15 28Right-handed alpha
Helix 10
AB1
B
73 86Right-handed alpha
Helix 11
AB2
B
97 115Right-handed alpha
Helix 12
AB3
B
141 155Right-handed alpha
Helix 13
AB4
B
166 171Right-handed alpha
Helix 14
AB5
B
172 177Right-handed alpha
Helix 15
AB6
B
193 205Right-handed alpha
Helix 16
AB7
B
206 216Right-handed alpha
Helix 17
AB8
C
15 28Right-handed alpha
Helix 18
AB9
C
73 86Right-handed alpha
Helix 19
AC1
C
97 113Right-handed alpha
Helix 20
AC2
C
144 155Right-handed alpha
Helix 21
AC3
C
166 171Right-handed alpha
Helix 22
AC4
C
193 205Right-handed alpha
Helix 23
AC5
D
15 28Right-handed alpha
Helix 24
AC6
D
73 86Right-handed alpha
Helix 25
AC7
D
97 111Right-handed alpha
Helix 26
AC8
D
144 155Right-handed alpha
Helix 27
AC9
D
166 171Right-handed alpha
Helix 28
AD1
D
193 205Right-handed alpha
Helix 29
AD2
D
206 211Right-handed alpha
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There are 4 sheets in PDB entry 4ZB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
7 11parallel
Strand 3
A
60 63anti-parallel
Strand 4
A
70 72anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
7 12parallel
Strand 3
B
60 63anti-parallel
Strand 4
B
70 72anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 36first strand
Strand 2
C
7 11parallel
Strand 3
C
60 63anti-parallel
Strand 4
C
70 72anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 35first strand
Strand 2
D
7 10parallel
Strand 3
D
60 63anti-parallel
Strand 4
D
70 72anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il