Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZBL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZBL entry

There are 2 chains in PDB entry 4ZBL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 1ILE 64
A
GLU 68ILE 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4ZBL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
3 9Right-handed 310
Helix 2
AA2
A
57 61Right-handed 310
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
80 85Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4ZBL.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
139 142first strand
Strand 2
A
156 167anti-parallel
Strand 3
A
172 183anti-parallel
Strand 4
A
90 98anti-parallel
Strand 5
A
103 113anti-parallel
Strand 6
A
116 126anti-parallel
Strand 7
A
12 22parallel
Strand 8
A
25 35anti-parallel
Strand 9
A
41 48anti-parallel
Strand 10
A
213 223anti-parallel
Strand 11
A
195 205anti-parallel
Strand 12
A
145 152anti-parallel
Strand 13
A
156 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il