Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZE8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZE8 entry

There are 3 chains in PDB entry 4ZE8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 31	GLY 521
B	GLU 31	GLY 521
C	GLU 31	PHE 285

There are 80 helices in PDB entry 4ZE8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	64	Right-handed alpha
Helix 2	AA2	A	73	77	Right-handed 310
Helix 3	AA3	A	117	125	Right-handed alpha
Helix 4	AA4	A	134	139	Right-handed alpha
Helix 5	AA5	A	170	175	Right-handed alpha
Helix 6	AA6	A	184	199	Right-handed alpha
Helix 7	AA7	A	242	252	Right-handed alpha
Helix 8	AA8	A	262	264	Right-handed 310
Helix 9	AA9	A	265	270	Right-handed alpha
Helix 10	AB1	A	294	298	Right-handed 310
Helix 11	AB2	A	299	309	Right-handed alpha
Helix 12	AB3	A	311	321	Right-handed alpha
Helix 13	AB4	A	332	339	Right-handed 310
Helix 14	AB5	A	349	360	Right-handed alpha
Helix 15	AB6	A	378	392	Right-handed alpha
Helix 16	AB7	A	409	413	Right-handed 310
Helix 17	AB8	A	427	436	Right-handed alpha
Helix 18	AB9	A	439	444	Right-handed alpha
Helix 19	AC1	A	450	463	Right-handed alpha
Helix 20	AC2	A	466	484	Right-handed alpha
Helix 21	AC3	B	56	64	Right-handed alpha
Helix 22	AC4	B	73	77	Right-handed 310
Helix 23	AC5	B	117	125	Right-handed alpha
Helix 24	AC6	B	132	136	Right-handed 310
Helix 25	AC7	B	170	175	Right-handed alpha
Helix 26	AC8	B	184	199	Right-handed alpha
Helix 27	AC9	B	242	252	Right-handed alpha
Helix 28	AD1	B	262	264	Right-handed 310
Helix 29	AD2	B	265	271	Right-handed alpha
Helix 30	AD3	B	294	298	Right-handed 310
Helix 31	AD4	B	299	309	Right-handed alpha
Helix 32	AD5	B	311	321	Right-handed alpha
Helix 33	AD6	B	332	339	Right-handed 310
Helix 34	AD7	B	349	360	Right-handed alpha
Helix 35	AD8	B	378	392	Right-handed alpha
Helix 36	AD9	B	409	413	Right-handed 310
Helix 37	AE1	B	427	436	Right-handed alpha
Helix 38	AE2	B	439	444	Right-handed alpha
Helix 39	AE3	B	450	463	Right-handed alpha
Helix 40	AE4	B	466	484	Right-handed alpha
Helix 41	AE5	C	56	64	Right-handed alpha
Helix 42	AE6	C	73	77	Right-handed 310
Helix 43	AE7	C	117	125	Right-handed alpha
Helix 44	AE8	C	132	136	Right-handed 310
Helix 45	AE9	C	170	175	Right-handed alpha
Helix 46	AF1	C	184	199	Right-handed alpha
Helix 47	AF2	C	242	252	Right-handed alpha
Helix 48	AF3	C	262	264	Right-handed 310
Helix 49	AF4	C	265	270	Right-handed alpha
Helix 50	AF5	C	294	298	Right-handed 310
Helix 51	AF6	C	299	309	Right-handed alpha
Helix 52	AF7	C	311	321	Right-handed alpha
Helix 53	AF8	C	332	339	Right-handed 310
Helix 54	AF9	C	349	360	Right-handed alpha
Helix 55	AG1	C	378	393	Right-handed alpha
Helix 56	AG2	C	409	413	Right-handed 310
Helix 57	AG3	C	427	436	Right-handed alpha
Helix 58	AG4	C	439	444	Right-handed alpha
Helix 59	AG5	C	450	463	Right-handed alpha
Helix 60	AG6	C	466	484	Right-handed alpha
Helix 61	AG7	D	56	64	Right-handed alpha
Helix 62	AG8	D	73	77	Right-handed 310
Helix 63	AG9	D	117	125	Right-handed alpha
Helix 64	AH1	D	134	139	Right-handed alpha
Helix 65	AH2	D	170	175	Right-handed alpha
Helix 66	AH3	D	184	199	Right-handed alpha
Helix 67	AH4	D	242	252	Right-handed alpha
Helix 68	AH5	D	262	264	Right-handed 310
Helix 69	AH6	D	265	271	Right-handed alpha
Helix 70	AH7	D	294	298	Right-handed 310
Helix 71	AH8	D	299	309	Right-handed alpha
Helix 72	AH9	D	311	321	Right-handed alpha
Helix 73	AI1	D	332	339	Right-handed 310
Helix 74	AI2	D	349	360	Right-handed alpha
Helix 75	AI3	D	378	392	Right-handed alpha
Helix 76	AI4	D	409	413	Right-handed 310
Helix 77	AI5	D	427	436	Right-handed alpha
Helix 78	AI6	D	439	444	Right-handed alpha
Helix 79	AI7	D	450	463	Right-handed alpha
Helix 80	AI8	D	466	484	Right-handed alpha

There are 19 sheets in PDB entry 4ZE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	212	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	234	239	anti-parallel
Strand 4	A	35	39	parallel
Strand 5	A	257	261	parallel
Strand 6	A	493	499	anti-parallel
Strand 7	A	275	281	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	70	first strand
Strand 2	A	84	86	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	96	first strand
Strand 2	A	99	104	anti-parallel
Strand 3	A	159	164	anti-parallel
Strand 4	A	149	156	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	401	first strand
Strand 2	A	367	371	parallel
Strand 3	A	415	421	parallel
Strand 4	A	284	290	anti-parallel
Strand 5	A	486	490	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	212	first strand
Strand 2	B	216	221	anti-parallel
Strand 3	B	234	239	anti-parallel
Strand 4	B	35	39	parallel
Strand 5	B	257	261	parallel
Strand 6	B	493	499	anti-parallel
Strand 7	B	275	281	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	84	86	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	96	first strand
Strand 2	B	99	104	anti-parallel
Strand 3	B	159	164	anti-parallel
Strand 4	B	149	156	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	401	first strand
Strand 2	B	367	371	parallel
Strand 3	B	415	421	parallel
Strand 4	B	284	290	anti-parallel
Strand 5	B	486	490	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	502	503	first strand
Strand 2	B	519	520	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	212	first strand
Strand 2	C	216	221	anti-parallel
Strand 3	C	234	239	anti-parallel
Strand 4	C	35	39	parallel
Strand 5	C	257	261	parallel
Strand 6	C	493	499	anti-parallel
Strand 7	C	275	281	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	70	first strand
Strand 2	C	84	86	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	96	first strand
Strand 2	C	99	104	anti-parallel
Strand 3	C	159	164	anti-parallel
Strand 4	C	149	156	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	397	401	first strand
Strand 2	C	367	371	parallel
Strand 3	C	415	421	parallel
Strand 4	C	284	290	anti-parallel
Strand 5	C	486	490	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	503	first strand
Strand 2	C	519	520	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	212	first strand
Strand 2	D	216	221	anti-parallel
Strand 3	D	234	239	anti-parallel
Strand 4	D	35	39	parallel
Strand 5	D	257	261	parallel
Strand 6	D	493	499	anti-parallel
Strand 7	D	275	281	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	70	first strand
Strand 2	D	84	86	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	96	first strand
Strand 2	D	99	104	anti-parallel
Strand 3	D	159	164	anti-parallel
Strand 4	D	149	156	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	397	401	first strand
Strand 2	D	367	371	parallel
Strand 3	D	415	421	parallel
Strand 4	D	284	290	anti-parallel
Strand 5	D	486	490	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	502	503	first strand
Strand 2	D	519	520	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZE8

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZE8