Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZG0 entry

There are 2 chains in PDB entry 4ZG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8GLU 204
B
 GLU 8GLU 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4ZG0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
41 43Right-handed 310
Helix 3
AA3
A
73 83Right-handed alpha
Helix 4
AA4
A
92 94Right-handed 310
Helix 5
AA5
A
118 130Right-handed alpha
Helix 6
AA6
A
156 162Right-handed alpha
Helix 7
AA7
A
166 180Right-handed alpha
Helix 8
AA8
A
184 204Right-handed alpha
Helix 9
AA9
B
13 18Right-handed alpha
Helix 10
AB1
B
41 43Right-handed 310
Helix 11
AB2
B
73 81Right-handed alpha
Helix 12
AB3
B
92 94Right-handed 310
Helix 13
AB4
B
118 130Right-handed alpha
Helix 14
AB5
B
156 162Right-handed alpha
Helix 15
AB6
B
166 180Right-handed alpha
Helix 16
AB7
B
184 204Right-handed alpha
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There are 4 sheets in PDB entry 4ZG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
108 117anti-parallel
Strand 4
A
25 40parallel
Strand 5
A
44 55anti-parallel
Strand 6
A
64 67first strand
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
44 55anti-parallel
Strand 3
A
25 40anti-parallel
Strand 4
A
139 145first strand
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
96 101anti-parallel
Strand 3
B
108 117anti-parallel
Strand 4
B
25 40parallel
Strand 5
B
44 55anti-parallel
Strand 6
B
64 67first strand
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
44 55anti-parallel
Strand 3
B
25 40anti-parallel
Strand 4
B
139 145first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il