Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZG5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZG5 entry

There are 4 chains in PDB entry 4ZG5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	GLY 252
A	MET 1	ALA 250
C	MET 1	ALA 249
G	MET 1	GLY 252

There are 33 helices in PDB entry 4ZG5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	13	27	Right-handed alpha
Helix 2	AA2	D	67	78	Right-handed alpha
Helix 3	AA3	D	97	103	Right-handed 310
Helix 4	AA4	D	104	116	Right-handed alpha
Helix 5	AA5	D	137	156	Right-handed alpha
Helix 6	AA6	D	171	175	Right-handed 310
Helix 7	AA7	D	219	226	Right-handed alpha
Helix 8	AA8	D	240	244	Right-handed 310
Helix 9	AA9	A	13	27	Right-handed alpha
Helix 10	AB1	A	67	78	Right-handed alpha
Helix 11	AB2	A	97	103	Right-handed 310
Helix 12	AB3	A	104	116	Right-handed alpha
Helix 13	AB4	A	137	155	Right-handed alpha
Helix 14	AB5	A	171	175	Right-handed 310
Helix 15	AB6	A	219	226	Right-handed alpha
Helix 16	AB7	A	240	244	Right-handed 310
Helix 17	AB8	C	13	27	Right-handed alpha
Helix 18	AB9	C	67	78	Right-handed alpha
Helix 19	AC1	C	97	103	Right-handed 310
Helix 20	AC2	C	104	116	Right-handed alpha
Helix 21	AC3	C	137	155	Right-handed alpha
Helix 22	AC4	C	171	175	Right-handed 310
Helix 23	AC5	C	219	226	Right-handed alpha
Helix 24	AC6	C	240	242	Right-handed 310
Helix 25	AC7	C	243	248	Right-handed alpha
Helix 26	AC8	G	13	27	Right-handed alpha
Helix 27	AC9	G	67	78	Right-handed alpha
Helix 28	AD1	G	97	103	Right-handed 310
Helix 29	AD2	G	104	116	Right-handed alpha
Helix 30	AD3	G	137	155	Right-handed alpha
Helix 31	AD4	G	171	175	Right-handed 310
Helix 32	AD5	G	219	226	Right-handed alpha
Helix 33	AD6	G	240	244	Right-handed 310

There are 10 sheets in PDB entry 4ZG5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	58	first strand
Strand 2	D	61	65	anti-parallel
Strand 3	D	30	35	parallel
Strand 4	D	3	6	parallel
Strand 5	D	86	93	parallel
Strand 6	D	120	125	parallel
Strand 7	D	161	167	parallel
Strand 8	D	228	235	anti-parallel
Strand 9	D	177	180	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	130	first strand
Strand 2	D	133	135	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	190	196	first strand
Strand 2	D	202	208	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	61	64	anti-parallel
Strand 3	A	29	35	parallel
Strand 4	A	2	6	parallel
Strand 5	A	86	93	parallel
Strand 6	A	120	125	parallel
Strand 7	A	161	167	parallel
Strand 8	A	228	235	anti-parallel
Strand 9	A	177	180	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	196	first strand
Strand 2	A	202	208	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	61	64	anti-parallel
Strand 3	C	30	35	parallel
Strand 4	C	3	6	parallel
Strand 5	C	86	93	parallel
Strand 6	C	120	125	parallel
Strand 7	C	161	167	parallel
Strand 8	C	228	235	anti-parallel
Strand 9	C	177	180	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	130	first strand
Strand 2	C	133	135	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	196	first strand
Strand 2	C	202	209	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	58	first strand
Strand 2	G	61	64	anti-parallel
Strand 3	G	30	35	parallel
Strand 4	G	3	6	parallel
Strand 5	G	86	93	parallel
Strand 6	G	119	125	parallel
Strand 7	G	161	167	parallel
Strand 8	G	228	235	anti-parallel
Strand 9	G	177	180	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	190	196	first strand
Strand 2	G	202	208	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZG5

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZG5