Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZGO entry

There are 2 chains in PDB entry 4ZGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LYS 274
B
 THR 2LYS 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4ZGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 13Right-handed alpha
Helix 2
AA2
A
14 23Right-handed alpha
Helix 3
AA3
A
24 26Right-handed 310
Helix 4
AA4
A
36 44Right-handed alpha
Helix 5
AA5
A
75 89Right-handed alpha
Helix 6
AA6
A
102 109Right-handed 310
Helix 7
AA7
A
118 128Right-handed alpha
Helix 8
AA8
A
129 138Right-handed alpha
Helix 9
AA9
A
170 172Right-handed 310
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
201 215Right-handed alpha
Helix 12
AB3
A
253 260Right-handed alpha
Helix 13
AB4
B
6 13Right-handed alpha
Helix 14
AB5
B
14 23Right-handed alpha
Helix 15
AB6
B
36 43Right-handed alpha
Helix 16
AB7
B
75 89Right-handed alpha
Helix 17
AB8
B
104 108Right-handed 310
Helix 18
AB9
B
118 128Right-handed alpha
Helix 19
AC1
B
129 138Right-handed alpha
Helix 20
AC2
B
170 172Right-handed 310
Helix 21
AC3
B
195 201Right-handed alpha
Helix 22
AC4
B
201 215Right-handed alpha
Helix 23
AC5
B
253 259Right-handed alpha
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There are 4 sheets in PDB entry 4ZGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
161 165anti-parallel
Strand 3
A
93 96anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 242first strand
Strand 2
A
224 231anti-parallel
Strand 3
A
174 180anti-parallel
Strand 4
A
183 189anti-parallel
Strand 5
A
268 270parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
93 96anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 242first strand
Strand 2
B
224 231anti-parallel
Strand 3
B
174 180anti-parallel
Strand 4
B
183 189anti-parallel
Strand 5
B
268 270parallel
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