Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZI5 entry

There are 2 chains in PDB entry 4ZI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1GLY 237
B
 GLY -1GLY 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 4ZI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 55Right-handed alpha
Helix 2
AA2
A
72 75Right-handed 310
Helix 3
AA3
A
76 85Right-handed alpha
Helix 4
AA4
A
86 103Right-handed alpha
Helix 5
AA5
A
118 130Right-handed alpha
Helix 6
AA6
A
171 186Right-handed alpha
Helix 7
AA7
A
205 210Right-handed 310
Helix 8
AA8
A
217 236Right-handed alpha
Helix 9
AA9
B
42 55Right-handed alpha
Helix 10
AB1
B
76 85Right-handed alpha
Helix 11
AB2
B
86 103Right-handed alpha
Helix 12
AB3
B
118 130Right-handed alpha
Helix 13
AB4
B
171 186Right-handed alpha
Helix 14
AB5
B
205 210Right-handed 310
Helix 15
AB6
B
217 236Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 4ZI5.

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
13 21anti-parallel
Strand 3
A
58 61anti-parallel
Strand 4
A
29 35parallel
Strand 5
A
107 117parallel
Strand 6
A
136 140parallel
Strand 7
A
158 164parallel
Strand 8
A
189 194parallel
Strand 9
B
189 194anti-parallel
Strand 10
B
158 164parallel
Strand 11
B
136 140parallel
Strand 12
B
107 117parallel
Strand 13
B
29 35parallel
Strand 14
B
58 61parallel
Strand 15
B
13 21anti-parallel
Strand 16
B
2 10anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il