Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZJG entry

There is 1 chain in PDB entry 4ZJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 57LYS 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 4ZJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 100Right-handed alpha
Helix 2
AA2
A
206 215Right-handed alpha
Helix 3
AA3
A
259 264Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4ZJG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 77first strand
Strand 2
A
80 87anti-parallel
Strand 3
A
123 126anti-parallel
Strand 4
A
116 117anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
101 105anti-parallel
Strand 3
A
134 139anti-parallel
Strand 4
A
155 160anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
184 190anti-parallel
Strand 3
A
250 255anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 179first strand
Strand 2
A
284 289parallel
Strand 3
A
266 272anti-parallel
Strand 4
A
194 202anti-parallel
Strand 5
A
232 241anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 299first strand
Strand 2
A
302 309anti-parallel
Strand 3
A
341 345anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 335first strand
Strand 2
A
320 324anti-parallel
Strand 3
A
352 357anti-parallel
Strand 4
A
360 365anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il