Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZJH entry

There is 1 chain in PDB entry 4ZJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -2LEU 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4ZJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
180 184Right-handed 310
Helix 2
AA2
A
206 216Right-handed alpha
Helix 3
AA3
A
225 230Right-handed alpha
Helix 4
AA4
A
259 264Right-handed 310
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There are 4 sheets in PDB entry 4ZJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 254first strand
Strand 2
A
185 190anti-parallel
Strand 3
A
167 170anti-parallel
Strand 4
A
279 280parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 241first strand
Strand 2
A
194 202anti-parallel
Strand 3
A
266 273anti-parallel
Strand 4
A
284 289anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 299first strand
Strand 2
A
302 309anti-parallel
Strand 3
A
341 345anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 335first strand
Strand 2
A
320 324anti-parallel
Strand 3
A
352 357anti-parallel
Strand 4
A
360 365anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il