Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZJM entry

There are 22 chains in PDB entry 4ZJM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 29	PRO 29
A	VAL 31	VAL 76
A	SER 78	THR 103
A	ASP 105	ASN 128
A	SER 130	THR 139
B	SER 27	GLY 35
B	ASP 37	ASN 128
B	SER 130	SER 138
C	GLY 28	VAL 76
C	SER 78	SER 138
D	GLY 28	ASN 128
D	SER 130	CYS 137
E	GLY 28	PRO 29
E	VAL 31	GLY 35
E	ASP 37	HIS 142
F	SER 27	VAL 76
F	SER 78	TYR 109
F	ILE 111	THR 139
G	GLY 28	GLY 35
G	ASP 37	VAL 76
G	SER 78	ASN 128
G	SER 130	THR 139

There are no helices in PDB entry 4ZJM

There are 14 sheets in PDB entry 4ZJM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	30	33	anti-parallel
Strand 3	A	127	136	anti-parallel
Strand 4	A	108	117	anti-parallel
Strand 5	A	99	105	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	49	first strand
Strand 2	A	52	57	anti-parallel
Strand 3	A	64	69	anti-parallel
Strand 4	A	76	84	anti-parallel
Strand 5	A	87	92	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	30	33	anti-parallel
Strand 3	B	127	136	anti-parallel
Strand 4	B	108	117	anti-parallel
Strand 5	B	100	105	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	49	first strand
Strand 2	B	52	57	anti-parallel
Strand 3	B	64	69	anti-parallel
Strand 4	B	76	84	anti-parallel
Strand 5	B	87	92	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	30	33	anti-parallel
Strand 3	C	127	136	anti-parallel
Strand 4	C	108	117	anti-parallel
Strand 5	C	99	105	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	49	first strand
Strand 2	C	52	57	anti-parallel
Strand 3	C	65	69	anti-parallel
Strand 4	C	76	84	anti-parallel
Strand 5	C	87	92	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	30	33	anti-parallel
Strand 3	D	127	136	anti-parallel
Strand 4	D	108	117	anti-parallel
Strand 5	D	87	92	anti-parallel
Strand 6	D	76	84	anti-parallel
Strand 7	D	65	69	anti-parallel
Strand 8	D	52	57	anti-parallel
Strand 9	D	44	49	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	30	33	anti-parallel
Strand 3	D	127	136	anti-parallel
Strand 4	D	108	117	anti-parallel
Strand 5	D	99	105	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	36	37	first strand
Strand 2	E	30	33	anti-parallel
Strand 3	E	127	136	anti-parallel
Strand 4	E	108	117	anti-parallel
Strand 5	E	99	105	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	49	first strand
Strand 2	E	52	57	anti-parallel
Strand 3	E	64	69	anti-parallel
Strand 4	E	76	84	anti-parallel
Strand 5	E	87	92	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	37	first strand
Strand 2	F	30	33	anti-parallel
Strand 3	F	127	136	anti-parallel
Strand 4	F	108	117	anti-parallel
Strand 5	F	99	105	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	49	first strand
Strand 2	F	52	57	anti-parallel
Strand 3	F	64	69	anti-parallel
Strand 4	F	76	84	anti-parallel
Strand 5	F	87	92	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	36	37	first strand
Strand 2	G	30	33	anti-parallel
Strand 3	G	127	136	anti-parallel
Strand 4	G	108	117	anti-parallel
Strand 5	G	99	105	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	49	first strand
Strand 2	G	52	57	anti-parallel
Strand 3	G	64	69	anti-parallel
Strand 4	G	76	84	anti-parallel
Strand 5	G	87	92	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZJM

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJM