Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZJV entry

There are 6 chains in PDB entry 4ZJV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 703	GLU 985
B	LEU 703	GLN 982
C	LYS 336	HIS 393
C	LEU 396	PRO 398
D	SER 337	HIS 393
D	LEU 396	GLU 399

There are 32 helices in PDB entry 4ZJV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	708	710	Right-handed 310
Helix 2	AA2	A	752	768	Right-handed alpha
Helix 3	AA3	A	797	805	Right-handed alpha
Helix 4	AA4	A	806	809	Right-handed 310
Helix 5	AA5	A	810	831	Right-handed alpha
Helix 6	AA6	A	839	841	Right-handed 310
Helix 7	AA7	A	877	881	Right-handed 310
Helix 8	AA8	A	882	888	Right-handed alpha
Helix 9	AA9	A	892	909	Right-handed alpha
Helix 10	AB1	A	919	921	Right-handed 310
Helix 11	AB2	A	922	929	Right-handed alpha
Helix 12	AB3	A	940	950	Right-handed alpha
Helix 13	AB4	A	954	958	Right-handed 310
Helix 14	AB5	A	960	972	Right-handed alpha
Helix 15	AB6	A	974	979	Right-handed alpha
Helix 16	AB7	B	708	710	Right-handed 310
Helix 17	AB8	B	752	767	Right-handed alpha
Helix 18	AB9	B	797	805	Right-handed alpha
Helix 19	AC1	B	806	809	Right-handed 310
Helix 20	AC2	B	810	831	Right-handed alpha
Helix 21	AC3	B	839	841	Right-handed 310
Helix 22	AC4	B	877	881	Right-handed 310
Helix 23	AC5	B	882	889	Right-handed alpha
Helix 24	AC6	B	892	909	Right-handed alpha
Helix 25	AC7	B	919	921	Right-handed 310
Helix 26	AC8	B	922	929	Right-handed alpha
Helix 27	AC9	B	940	950	Right-handed alpha
Helix 28	AD1	B	954	958	Right-handed 310
Helix 29	AD2	B	960	973	Right-handed alpha
Helix 30	AD3	B	974	979	Right-handed alpha
Helix 31	AD4	C	341	345	Right-handed 310
Helix 32	AD5	D	341	345	Right-handed 310

There are 12 sheets in PDB entry 4ZJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	706	first strand
Strand 2	A	777	780	parallel
Strand 3	A	786	791	anti-parallel
Strand 4	A	740	747	anti-parallel
Strand 5	A	724	731	anti-parallel
Strand 6	A	712	720	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	833	834	first strand
Strand 2	A	860	861	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	843	847	first strand
Strand 2	A	850	853	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	869	870	first strand
Strand 2	A	890	891	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	875	876	first strand
Strand 2	C	390	397	anti-parallel
Strand 3	C	378	382	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	931	932	first strand
Strand 2	C	350	351	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	720	first strand
Strand 2	B	725	731	anti-parallel
Strand 3	B	740	746	anti-parallel
Strand 4	B	786	791	anti-parallel
Strand 5	B	777	782	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	833	834	first strand
Strand 2	B	860	861	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	843	847	first strand
Strand 2	B	850	853	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	869	870	first strand
Strand 2	B	890	891	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	875	876	first strand
Strand 2	D	394	397	anti-parallel
Strand 3	D	378	380	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	931	932	first strand
Strand 2	D	350	351	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZJV

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZJV