Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZKF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZKF entry

There is 1 chain in PDB entry 4ZKF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 148LYS 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4ZKF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 156Right-handed 310
Helix 2
AA2
A
189 193Right-handed 310
Helix 3
AA3
A
221 223Right-handed 310
Helix 4
AA4
A
238 242Right-handed 310
Helix 5
AA5
A
278 283Right-handed alpha
Helix 6
AA6
A
284 286Right-handed 310
Helix 7
AA7
A
304 309Right-handed alpha
Helix 8
AA8
A
310 316Right-handed alpha
Helix 9
AA9
A
322 327Right-handed alpha
Helix 10
AB1
A
327 342Right-handed alpha
Helix 11
AB2
A
353 360Right-handed alpha
Helix 12
AB3
A
360 368Right-handed alpha
Helix 13
AB4
A
401 408Right-handed alpha
Helix 14
AB5
A
411 419Right-handed alpha
Helix 15
AB6
A
421 430Right-handed alpha
Helix 16
AB7
A
463 484Right-handed alpha
Helix 17
AB8
A
503 512Right-handed alpha
Helix 18
AB9
A
518 523Right-handed 310
Helix 19
AC1
A
580 585Right-handed alpha
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There are 8 sheets in PDB entry 4ZKF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 168first strand
Strand 2
A
182 186anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
270 271parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 227first strand
Strand 2
A
194 200anti-parallel
Strand 3
A
246 251anti-parallel
Strand 4
A
262 265anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 376first strand
Strand 2
A
381 387anti-parallel
Strand 3
A
346 352anti-parallel
Strand 4
A
294 301parallel
Strand 5
A
602 608anti-parallel
Strand 6
A
570 575anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 396first strand
Strand 2
A
434 442anti-parallel
Strand 3
A
399 400anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 396first strand
Strand 2
A
434 442anti-parallel
Strand 3
A
449 456anti-parallel
Strand 4
A
491 496parallel
Strand 5
A
561 566anti-parallel
Strand 6
A
540 542anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 514first strand
Strand 2
A
534 535anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 553first strand
Strand 2
A
556 558anti-parallel
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