Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZM3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZM3 entry

There are 4 chains in PDB entry 4ZM3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 37	LEU 443
B	LEU 39	LEU 443
C	PRO 38	LEU 443
D	LEU 39	LEU 443

There are 55 helices in PDB entry 4ZM3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	65	Right-handed 310
Helix 2	AA2	A	73	86	Right-handed alpha
Helix 3	AA3	A	95	108	Right-handed alpha
Helix 4	AA4	A	119	136	Right-handed alpha
Helix 5	AA5	A	194	206	Right-handed alpha
Helix 6	AA6	A	229	242	Right-handed alpha
Helix 7	AA7	A	259	266	Right-handed alpha
Helix 8	AA8	A	276	280	Right-handed 310
Helix 9	AA9	A	311	327	Right-handed alpha
Helix 10	AB1	A	330	353	Right-handed alpha
Helix 11	AB2	A	383	391	Right-handed alpha
Helix 12	AB3	A	392	406	Right-handed alpha
Helix 13	AB4	A	425	442	Right-handed alpha
Helix 14	AB5	B	61	65	Right-handed 310
Helix 15	AB6	B	73	86	Right-handed alpha
Helix 16	AB7	B	95	108	Right-handed alpha
Helix 17	AB8	B	119	136	Right-handed alpha
Helix 18	AB9	B	194	206	Right-handed alpha
Helix 19	AC1	B	229	242	Right-handed alpha
Helix 20	AC2	B	259	266	Right-handed alpha
Helix 21	AC3	B	276	280	Right-handed 310
Helix 22	AC4	B	311	327	Right-handed alpha
Helix 23	AC5	B	330	353	Right-handed alpha
Helix 24	AC6	B	383	391	Right-handed alpha
Helix 25	AC7	B	392	406	Right-handed alpha
Helix 26	AC8	B	425	442	Right-handed alpha
Helix 27	AC9	C	61	65	Right-handed 310
Helix 28	AD1	C	73	86	Right-handed alpha
Helix 29	AD2	C	94	108	Right-handed alpha
Helix 30	AD3	C	119	136	Right-handed alpha
Helix 31	AD4	C	158	162	Right-handed 310
Helix 32	AD5	C	194	206	Right-handed alpha
Helix 33	AD6	C	229	242	Right-handed alpha
Helix 34	AD7	C	259	266	Right-handed alpha
Helix 35	AD8	C	276	280	Right-handed 310
Helix 36	AD9	C	290	295	Right-handed alpha
Helix 37	AE1	C	311	327	Right-handed alpha
Helix 38	AE2	C	330	353	Right-handed alpha
Helix 39	AE3	C	383	391	Right-handed alpha
Helix 40	AE4	C	392	406	Right-handed alpha
Helix 41	AE5	C	425	442	Right-handed alpha
Helix 42	AE6	D	61	65	Right-handed 310
Helix 43	AE7	D	73	86	Right-handed alpha
Helix 44	AE8	D	95	108	Right-handed alpha
Helix 45	AE9	D	119	136	Right-handed alpha
Helix 46	AF1	D	158	163	Right-handed 310
Helix 47	AF2	D	194	206	Right-handed alpha
Helix 48	AF3	D	229	242	Right-handed alpha
Helix 49	AF4	D	259	266	Right-handed alpha
Helix 50	AF5	D	276	280	Right-handed 310
Helix 51	AF6	D	311	327	Right-handed alpha
Helix 52	AF7	D	330	353	Right-handed alpha
Helix 53	AF8	D	383	391	Right-handed alpha
Helix 54	AF9	D	392	406	Right-handed alpha
Helix 55	AG1	D	425	442	Right-handed alpha

There are 12 sheets in PDB entry 4ZM3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	45	first strand
Strand 2	A	48	51	anti-parallel
Strand 3	A	56	59	anti-parallel
Strand 4	A	408	409	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	285	289	anti-parallel
Strand 3	A	271	274	anti-parallel
Strand 4	A	244	249	parallel
Strand 5	A	209	214	parallel
Strand 6	A	139	143	parallel
Strand 7	A	187	190	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	362	first strand
Strand 2	A	365	370	anti-parallel
Strand 3	A	418	419	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	45	first strand
Strand 2	B	48	51	anti-parallel
Strand 3	B	56	59	anti-parallel
Strand 4	B	408	409	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	117	first strand
Strand 2	B	285	289	anti-parallel
Strand 3	B	271	274	anti-parallel
Strand 4	B	244	249	parallel
Strand 5	B	209	214	parallel
Strand 6	B	139	143	parallel
Strand 7	B	187	190	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	362	first strand
Strand 2	B	365	370	anti-parallel
Strand 3	B	418	419	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	45	first strand
Strand 2	C	48	51	anti-parallel
Strand 3	C	56	59	anti-parallel
Strand 4	C	408	409	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	117	first strand
Strand 2	C	285	289	anti-parallel
Strand 3	C	271	274	anti-parallel
Strand 4	C	244	249	parallel
Strand 5	C	209	214	parallel
Strand 6	C	139	143	parallel
Strand 7	C	187	190	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	362	first strand
Strand 2	C	365	370	anti-parallel
Strand 3	C	418	419	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	45	first strand
Strand 2	D	48	51	anti-parallel
Strand 3	D	56	59	anti-parallel
Strand 4	D	408	409	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	117	first strand
Strand 2	D	285	289	anti-parallel
Strand 3	D	271	274	anti-parallel
Strand 4	D	244	249	parallel
Strand 5	D	209	214	parallel
Strand 6	D	139	143	parallel
Strand 7	D	187	190	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	362	first strand
Strand 2	D	365	370	anti-parallel
Strand 3	D	418	419	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZM3

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZM3