Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZM6 entry

There are 2 chains in PDB entry 4ZM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 8PHE 858
B
ASN 8PHE 858
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 4ZM6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
27 38Right-handed alpha
Helix 3
AA3
A
51 69Right-handed alpha
Helix 4
AA4
A
98 106Right-handed alpha
Helix 5
AA5
A
107 126Right-handed alpha
Helix 6
AA6
A
154 172Right-handed alpha
Helix 7
AA7
A
201 208Right-handed alpha
Helix 8
AA8
A
210 218Right-handed alpha
Helix 9
AA9
A
243 247Right-handed 310
Helix 10
AB1
A
272 277Right-handed alpha
Helix 11
AB2
A
280 292Right-handed alpha
Helix 12
AB3
A
303 319Right-handed alpha
Helix 13
AB4
A
322 341Right-handed alpha
Helix 14
AB5
A
342 349Right-handed alpha
Helix 15
AB6
A
351 355Right-handed 310
Helix 16
AB7
A
356 369Right-handed alpha
Helix 17
AB8
A
412 423Right-handed alpha
Helix 18
AB9
A
438 445Right-handed alpha
Helix 19
AC1
A
454 457Right-handed 310
Helix 20
AC2
A
458 472Right-handed alpha
Helix 21
AC3
A
482 489Right-handed 310
Helix 22
AC4
A
502 514Right-handed alpha
Helix 23
AC5
A
545 562Right-handed alpha
Helix 24
AC6
A
568 578Right-handed alpha
Helix 25
AC7
A
620 623Right-handed 310
Helix 26
AC8
A
626 643Right-handed alpha
Helix 27
AC9
A
664 677Right-handed alpha
Helix 28
AD1
A
699 710Right-handed alpha
Helix 29
AD2
A
717 719Right-handed 310
Helix 30
AD3
A
720 732Right-handed alpha
Helix 31
AD4
A
735 746Right-handed alpha
Helix 32
AD5
A
747 749Right-handed 310
Helix 33
AD6
A
810 826Right-handed alpha
Helix 34
AD7
A
838 844Right-handed alpha
Helix 35
AD8
B
11 15Right-handed 310
Helix 36
AD9
B
27 36Right-handed alpha
Helix 37
AE1
B
45 49Right-handed 310
Helix 38
AE2
B
51 69Right-handed alpha
Helix 39
AE3
B
98 106Right-handed alpha
Helix 40
AE4
B
107 125Right-handed alpha
Helix 41
AE5
B
154 172Right-handed alpha
Helix 42
AE6
B
201 208Right-handed alpha
Helix 43
AE7
B
210 218Right-handed alpha
Helix 44
AE8
B
243 247Right-handed 310
Helix 45
AE9
B
272 277Right-handed alpha
Helix 46
AF1
B
280 292Right-handed alpha
Helix 47
AF2
B
301 319Right-handed alpha
Helix 48
AF3
B
322 341Right-handed alpha
Helix 49
AF4
B
342 348Right-handed alpha
Helix 50
AF5
B
351 355Right-handed 310
Helix 51
AF6
B
356 369Right-handed alpha
Helix 52
AF7
B
412 421Right-handed alpha
Helix 53
AF8
B
438 445Right-handed alpha
Helix 54
AF9
B
454 457Right-handed 310
Helix 55
AG1
B
458 472Right-handed alpha
Helix 56
AG2
B
482 489Right-handed 310
Helix 57
AG3
B
502 514Right-handed alpha
Helix 58
AG4
B
545 562Right-handed alpha
Helix 59
AG5
B
568 578Right-handed alpha
Helix 60
AG6
B
620 623Right-handed 310
Helix 61
AG7
B
626 643Right-handed alpha
Helix 62
AG8
B
664 677Right-handed alpha
Helix 63
AG9
B
699 710Right-handed alpha
Helix 64
AH1
B
717 719Right-handed 310
Helix 65
AH2
B
720 732Right-handed alpha
Helix 66
AH3
B
735 746Right-handed alpha
Helix 67
AH4
B
747 749Right-handed 310
Helix 68
AH5
B
804 807Right-handed 310
Helix 69
AH6
B
810 826Right-handed alpha
Helix 70
AH7
B
838 844Right-handed alpha
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There are 9 sheets in PDB entry 4ZM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 130first strand
Strand 2
A
76 79parallel
Strand 3
A
41 44parallel
Strand 4
A
17 19parallel
Strand 5
A
296 298parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
178 181first strand
Strand 2
A
227 230parallel
Strand 3
A
264 267parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
373 377first strand
Strand 2
A
494 497anti-parallel
Strand 3
A
475 479parallel
Strand 4
A
447 452parallel
Strand 5
A
392 397parallel
Strand 6
A
426 431parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 543first strand
Strand 2
A
585 588anti-parallel
Strand 3
A
594 605anti-parallel
Strand 4
A
608 618anti-parallel
Strand 5
A
646 649parallel
Strand 6
A
856 858anti-parallel
Strand 7
A
680 681anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
660 661first strand
Strand 2
A
847 854anti-parallel
Strand 3
A
686 692anti-parallel
Strand 4
A
830 836anti-parallel
Strand 5
A
794 802parallel
Strand 6
A
763 771anti-parallel
Strand 7
A
751 756anti-parallel
Strand 8
A
711 715anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
264 267first strand
Strand 2
B
227 230parallel
Strand 3
B
175 181parallel
Strand 4
B
129 130parallel
Strand 5
B
76 79parallel
Strand 6
B
41 43parallel
Strand 7
B
17 19parallel
Strand 8
B
296 298parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
373 377first strand
Strand 2
B
494 497anti-parallel
Strand 3
B
475 479parallel
Strand 4
B
447 452parallel
Strand 5
B
392 397parallel
Strand 6
B
426 431parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
540 543first strand
Strand 2
B
585 588anti-parallel
Strand 3
B
594 605anti-parallel
Strand 4
B
608 618anti-parallel
Strand 5
B
646 649parallel
Strand 6
B
856 858anti-parallel
Strand 7
B
680 681anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
660 661first strand
Strand 2
B
847 854anti-parallel
Strand 3
B
686 692anti-parallel
Strand 4
B
830 836anti-parallel
Strand 5
B
794 802parallel
Strand 6
B
763 771anti-parallel
Strand 7
B
751 755anti-parallel
Strand 8
B
712 715anti-parallel
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