Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZM6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZM6 entry

There are 2 chains in PDB entry 4ZM6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 8	PHE 858
B	ASN 8	PHE 858

There are 70 helices in PDB entry 4ZM6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	15	Right-handed 310
Helix 2	AA2	A	27	38	Right-handed alpha
Helix 3	AA3	A	51	69	Right-handed alpha
Helix 4	AA4	A	98	106	Right-handed alpha
Helix 5	AA5	A	107	126	Right-handed alpha
Helix 6	AA6	A	154	172	Right-handed alpha
Helix 7	AA7	A	201	208	Right-handed alpha
Helix 8	AA8	A	210	218	Right-handed alpha
Helix 9	AA9	A	243	247	Right-handed 310
Helix 10	AB1	A	272	277	Right-handed alpha
Helix 11	AB2	A	280	292	Right-handed alpha
Helix 12	AB3	A	303	319	Right-handed alpha
Helix 13	AB4	A	322	341	Right-handed alpha
Helix 14	AB5	A	342	349	Right-handed alpha
Helix 15	AB6	A	351	355	Right-handed 310
Helix 16	AB7	A	356	369	Right-handed alpha
Helix 17	AB8	A	412	423	Right-handed alpha
Helix 18	AB9	A	438	445	Right-handed alpha
Helix 19	AC1	A	454	457	Right-handed 310
Helix 20	AC2	A	458	472	Right-handed alpha
Helix 21	AC3	A	482	489	Right-handed 310
Helix 22	AC4	A	502	514	Right-handed alpha
Helix 23	AC5	A	545	562	Right-handed alpha
Helix 24	AC6	A	568	578	Right-handed alpha
Helix 25	AC7	A	620	623	Right-handed 310
Helix 26	AC8	A	626	643	Right-handed alpha
Helix 27	AC9	A	664	677	Right-handed alpha
Helix 28	AD1	A	699	710	Right-handed alpha
Helix 29	AD2	A	717	719	Right-handed 310
Helix 30	AD3	A	720	732	Right-handed alpha
Helix 31	AD4	A	735	746	Right-handed alpha
Helix 32	AD5	A	747	749	Right-handed 310
Helix 33	AD6	A	810	826	Right-handed alpha
Helix 34	AD7	A	838	844	Right-handed alpha
Helix 35	AD8	B	11	15	Right-handed 310
Helix 36	AD9	B	27	36	Right-handed alpha
Helix 37	AE1	B	45	49	Right-handed 310
Helix 38	AE2	B	51	69	Right-handed alpha
Helix 39	AE3	B	98	106	Right-handed alpha
Helix 40	AE4	B	107	125	Right-handed alpha
Helix 41	AE5	B	154	172	Right-handed alpha
Helix 42	AE6	B	201	208	Right-handed alpha
Helix 43	AE7	B	210	218	Right-handed alpha
Helix 44	AE8	B	243	247	Right-handed 310
Helix 45	AE9	B	272	277	Right-handed alpha
Helix 46	AF1	B	280	292	Right-handed alpha
Helix 47	AF2	B	301	319	Right-handed alpha
Helix 48	AF3	B	322	341	Right-handed alpha
Helix 49	AF4	B	342	348	Right-handed alpha
Helix 50	AF5	B	351	355	Right-handed 310
Helix 51	AF6	B	356	369	Right-handed alpha
Helix 52	AF7	B	412	421	Right-handed alpha
Helix 53	AF8	B	438	445	Right-handed alpha
Helix 54	AF9	B	454	457	Right-handed 310
Helix 55	AG1	B	458	472	Right-handed alpha
Helix 56	AG2	B	482	489	Right-handed 310
Helix 57	AG3	B	502	514	Right-handed alpha
Helix 58	AG4	B	545	562	Right-handed alpha
Helix 59	AG5	B	568	578	Right-handed alpha
Helix 60	AG6	B	620	623	Right-handed 310
Helix 61	AG7	B	626	643	Right-handed alpha
Helix 62	AG8	B	664	677	Right-handed alpha
Helix 63	AG9	B	699	710	Right-handed alpha
Helix 64	AH1	B	717	719	Right-handed 310
Helix 65	AH2	B	720	732	Right-handed alpha
Helix 66	AH3	B	735	746	Right-handed alpha
Helix 67	AH4	B	747	749	Right-handed 310
Helix 68	AH5	B	804	807	Right-handed 310
Helix 69	AH6	B	810	826	Right-handed alpha
Helix 70	AH7	B	838	844	Right-handed alpha

There are 9 sheets in PDB entry 4ZM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	76	79	parallel
Strand 3	A	41	44	parallel
Strand 4	A	17	19	parallel
Strand 5	A	296	298	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	227	230	parallel
Strand 3	A	264	267	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	377	first strand
Strand 2	A	494	497	anti-parallel
Strand 3	A	475	479	parallel
Strand 4	A	447	452	parallel
Strand 5	A	392	397	parallel
Strand 6	A	426	431	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	543	first strand
Strand 2	A	585	588	anti-parallel
Strand 3	A	594	605	anti-parallel
Strand 4	A	608	618	anti-parallel
Strand 5	A	646	649	parallel
Strand 6	A	856	858	anti-parallel
Strand 7	A	680	681	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	660	661	first strand
Strand 2	A	847	854	anti-parallel
Strand 3	A	686	692	anti-parallel
Strand 4	A	830	836	anti-parallel
Strand 5	A	794	802	parallel
Strand 6	A	763	771	anti-parallel
Strand 7	A	751	756	anti-parallel
Strand 8	A	711	715	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	267	first strand
Strand 2	B	227	230	parallel
Strand 3	B	175	181	parallel
Strand 4	B	129	130	parallel
Strand 5	B	76	79	parallel
Strand 6	B	41	43	parallel
Strand 7	B	17	19	parallel
Strand 8	B	296	298	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	377	first strand
Strand 2	B	494	497	anti-parallel
Strand 3	B	475	479	parallel
Strand 4	B	447	452	parallel
Strand 5	B	392	397	parallel
Strand 6	B	426	431	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	540	543	first strand
Strand 2	B	585	588	anti-parallel
Strand 3	B	594	605	anti-parallel
Strand 4	B	608	618	anti-parallel
Strand 5	B	646	649	parallel
Strand 6	B	856	858	anti-parallel
Strand 7	B	680	681	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	660	661	first strand
Strand 2	B	847	854	anti-parallel
Strand 3	B	686	692	anti-parallel
Strand 4	B	830	836	anti-parallel
Strand 5	B	794	802	parallel
Strand 6	B	763	771	anti-parallel
Strand 7	B	751	755	anti-parallel
Strand 8	B	712	715	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZM6

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZM6