Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZO0 entry

There are 3 chains in PDB entry 4ZO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 206
B
 MET 1GLU 201
C
 HIS 0GLN 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4ZO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 19Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
44 48Right-handed 310
Helix 4
AA4
A
49 72Right-handed alpha
Helix 5
AA5
A
101 103Right-handed 310
Helix 6
AA6
A
104 120Right-handed alpha
Helix 7
AA7
A
151 157Right-handed alpha
Helix 8
AA8
A
172 176Right-handed 310
Helix 9
AA9
A
181 205Right-handed alpha
Helix 10
AB1
B
14 19Right-handed alpha
Helix 11
AB2
B
23 32Right-handed alpha
Helix 12
AB3
B
44 48Right-handed 310
Helix 13
AB4
B
49 72Right-handed alpha
Helix 14
AB5
B
104 121Right-handed alpha
Helix 15
AB6
B
151 156Right-handed alpha
Helix 16
AB7
B
172 176Right-handed 310
Helix 17
AB8
B
181 200Right-handed alpha
Helix 18
AB9
C
14 19Right-handed alpha
Helix 19
AC1
C
23 33Right-handed alpha
Helix 20
AC2
C
44 48Right-handed 310
Helix 21
AC3
C
49 72Right-handed alpha
Helix 22
AC4
C
104 119Right-handed alpha
Helix 23
AC5
C
151 157Right-handed alpha
Helix 24
AC6
C
172 176Right-handed 310
Helix 25
AC7
C
181 191Right-handed alpha
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There are 3 sheets in PDB entry 4ZO0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
4 11anti-parallel
Strand 3
A
89 96anti-parallel
Strand 4
A
78 84anti-parallel
Strand 5
A
165 170anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 134first strand
Strand 2
B
4 11anti-parallel
Strand 3
B
89 96anti-parallel
Strand 4
B
78 84anti-parallel
Strand 5
B
165 170anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 134first strand
Strand 2
C
4 11anti-parallel
Strand 3
C
89 96anti-parallel
Strand 4
C
78 84anti-parallel
Strand 5
C
165 170anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il