Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZO1 entry

There are 3 chains in PDB entry 4ZO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 HIS 210ASP 461
A
 HIS 687LEU 694
B
 PRO 231LEU 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 4ZO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
215 231Right-handed alpha
Helix 2
AA2
X
265 274Right-handed alpha
Helix 3
AA3
X
275 289Right-handed alpha
Helix 4
AA4
X
290 295Right-handed alpha
Helix 5
AA5
X
297 319Right-handed alpha
Helix 6
AA6
X
338 344Right-handed alpha
Helix 7
AA7
X
347 364Right-handed alpha
Helix 8
AA8
X
366 379Right-handed alpha
Helix 9
AA9
X
388 411Right-handed alpha
Helix 10
AB1
X
416 446Right-handed alpha
Helix 11
AB2
X
452 460Right-handed alpha
Helix 12
AB3
A
688 693Right-handed alpha
Helix 13
AB4
B
232 237Right-handed alpha
Helix 14
AB5
B
274 285Right-handed alpha
Helix 15
AB6
B
288 292Right-handed 310
Helix 16
AB7
B
293 317Right-handed alpha
Helix 17
AB8
B
318 320Right-handed 310
Helix 18
AB9
B
334 340Right-handed alpha
Helix 19
AC1
B
342 353Right-handed alpha
Helix 20
AC2
B
353 360Right-handed alpha
Helix 21
AC3
B
363 376Right-handed alpha
Helix 22
AC4
B
385 408Right-handed alpha
Helix 23
AC5
B
413 420Right-handed alpha
Helix 24
AC6
B
420 436Right-handed alpha
Helix 25
AC7
B
439 443Right-handed 310
Helix 26
AC8
B
448 455Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4ZO1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
244 245first strand
Strand 2
X
334 337parallel
Strand 3
X
327 330anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 324first strand
Strand 2
B
332 333anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il