Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZOG entry

There are 2 chains in PDB entry 4ZOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 233SER 501
B
 LYS 234SER 503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 4ZOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
238 240Right-handed 310
Helix 2
AA2
A
249 252Right-handed 310
Helix 3
AA3
A
263 265Right-handed 310
Helix 4
AA4
A
279 291Right-handed alpha
Helix 5
AA5
A
323 330Right-handed alpha
Helix 6
AA6
A
336 357Right-handed alpha
Helix 7
AA7
A
365 367Right-handed 310
Helix 8
AA8
A
373 375Right-handed 310
Helix 9
AA9
A
402 406Right-handed 310
Helix 10
AB1
A
407 414Right-handed alpha
Helix 11
AB2
A
417 434Right-handed alpha
Helix 12
AB3
A
444 446Right-handed 310
Helix 13
AB4
A
447 454Right-handed alpha
Helix 14
AB5
A
465 476Right-handed alpha
Helix 15
AB6
A
479 483Right-handed 310
Helix 16
AB7
A
485 501Right-handed alpha
Helix 17
AB8
B
238 240Right-handed 310
Helix 18
AB9
B
249 252Right-handed 310
Helix 19
AC1
B
263 265Right-handed 310
Helix 20
AC2
B
279 293Right-handed alpha
Helix 21
AC3
B
323 330Right-handed alpha
Helix 22
AC4
B
336 357Right-handed alpha
Helix 23
AC5
B
365 367Right-handed 310
Helix 24
AC6
B
373 375Right-handed 310
Helix 25
AC7
B
402 406Right-handed 310
Helix 26
AC8
B
407 414Right-handed alpha
Helix 27
AC9
B
417 434Right-handed alpha
Helix 28
AD1
B
447 454Right-handed alpha
Helix 29
AD2
B
465 476Right-handed alpha
Helix 30
AD3
B
479 483Right-handed 310
Helix 31
AD4
B
485 500Right-handed alpha
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There are 8 sheets in PDB entry 4ZOG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 247first strand
Strand 2
A
256 261anti-parallel
Strand 3
A
266 273anti-parallel
Strand 4
A
311 316anti-parallel
Strand 5
A
301 305anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
369 371anti-parallel
Strand 3
A
377 379anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 360first strand
Strand 2
A
385 386anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 394first strand
Strand 2
A
415 416anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 247first strand
Strand 2
B
256 261anti-parallel
Strand 3
B
266 273anti-parallel
Strand 4
B
311 316anti-parallel
Strand 5
B
301 305anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 322first strand
Strand 2
B
369 371anti-parallel
Strand 3
B
377 379anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 360first strand
Strand 2
B
385 386anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 394first strand
Strand 2
B
415 416anti-parallel
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