Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZOM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZOM entry

There are 4 chains in PDB entry 4ZOM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 265GLN 487
B
 ALA 265PHE 486
C
 THR 268PHE 486
D
 SER 266VAL 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 4ZOM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
267 285Right-handed alpha
Helix 2
AA2
A
288 295Right-handed alpha
Helix 3
AA3
A
296 298Right-handed 310
Helix 4
AA4
A
301 311Right-handed alpha
Helix 5
AA5
A
312 337Right-handed alpha
Helix 6
AA6
A
340 344Right-handed 310
Helix 7
AA7
A
345 366Right-handed alpha
Helix 8
AA8
A
384 392Right-handed 310
Helix 9
AA9
A
393 409Right-handed alpha
Helix 10
AB1
A
413 426Right-handed alpha
Helix 11
AB2
A
435 457Right-handed alpha
Helix 12
AB3
A
459 466Right-handed 310
Helix 13
AB4
A
470 481Right-handed alpha
Helix 14
AB5
A
483 487Right-handed 310
Helix 15
AB6
B
266 283Right-handed alpha
Helix 16
AB7
B
288 295Right-handed alpha
Helix 17
AB8
B
296 298Right-handed 310
Helix 18
AB9
B
301 310Right-handed alpha
Helix 19
AC1
B
312 337Right-handed alpha
Helix 20
AC2
B
345 366Right-handed alpha
Helix 21
AC3
B
384 392Right-handed 310
Helix 22
AC4
B
393 410Right-handed alpha
Helix 23
AC5
B
413 426Right-handed alpha
Helix 24
AC6
B
435 457Right-handed alpha
Helix 25
AC7
B
459 466Right-handed 310
Helix 26
AC8
B
468 486Right-handed alpha
Helix 27
AC9
C
269 284Right-handed alpha
Helix 28
AD1
C
288 295Right-handed alpha
Helix 29
AD2
C
296 298Right-handed 310
Helix 30
AD3
C
301 311Right-handed alpha
Helix 31
AD4
C
312 337Right-handed alpha
Helix 32
AD5
C
345 366Right-handed alpha
Helix 33
AD6
C
384 392Right-handed 310
Helix 34
AD7
C
393 409Right-handed alpha
Helix 35
AD8
C
413 426Right-handed alpha
Helix 36
AD9
C
435 457Right-handed alpha
Helix 37
AE1
C
459 463Right-handed 310
Helix 38
AE2
C
470 486Right-handed alpha
Helix 39
AE3
D
267 283Right-handed alpha
Helix 40
AE4
D
288 295Right-handed alpha
Helix 41
AE5
D
301 311Right-handed alpha
Helix 42
AE6
D
312 337Right-handed alpha
Helix 43
AE7
D
340 344Right-handed 310
Helix 44
AE8
D
345 366Right-handed alpha
Helix 45
AE9
D
384 392Right-handed 310
Helix 46
AF1
D
393 410Right-handed alpha
Helix 47
AF2
D
413 426Right-handed alpha
Helix 48
AF3
D
435 457Right-handed alpha
Helix 49
AF4
D
459 466Right-handed 310
Helix 50
AF5
D
468 480Right-handed alpha
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There are 4 sheets in PDB entry 4ZOM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
381 383anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 370first strand
Strand 2
B
375 378anti-parallel
Strand 3
B
381 383anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
369 370first strand
Strand 2
C
375 378anti-parallel
Strand 3
C
381 383anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
369 370first strand
Strand 2
D
375 378anti-parallel
Strand 3
D
381 383anti-parallel
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