Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZOY entry

There is 1 chain in PDB entry 4ZOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 54HIS 540
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4ZOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
103 105Right-handed 310
Helix 2
AA2
A
271 276Right-handed alpha
Helix 3
AA3
A
437 441Right-handed 310
Helix 4
AA4
A
500 504Right-handed 310
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There are 8 sheets in PDB entry 4ZOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
528 532anti-parallel
Strand 3
A
518 523anti-parallel
Strand 4
A
507 511anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
80 86anti-parallel
Strand 3
A
95 101anti-parallel
Strand 4
A
133 135anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 147first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
164 170anti-parallel
Strand 4
A
179 186anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
206 211anti-parallel
Strand 3
A
216 221anti-parallel
Strand 4
A
230 236anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 248first strand
Strand 2
A
254 259anti-parallel
Strand 3
A
264 268anti-parallel
Strand 4
A
285 289anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 307first strand
Strand 2
A
313 318anti-parallel
Strand 3
A
323 327anti-parallel
Strand 4
A
370 374anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 386first strand
Strand 2
A
392 397anti-parallel
Strand 3
A
402 406anti-parallel
Strand 4
A
413 417anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
426 431first strand
Strand 2
A
444 449anti-parallel
Strand 3
A
454 458anti-parallel
Strand 4
A
491 495anti-parallel
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