Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZPJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZPJ entry

There is 1 chain in PDB entry 4ZPJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 79PHE 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4ZPJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 111Right-handed alpha
Helix 2
AA2
A
130 144Right-handed alpha
Helix 3
AA3
A
155 169Right-handed alpha
Helix 4
AA4
A
181 186Right-handed alpha
Helix 5
AA5
A
205 215Right-handed alpha
Helix 6
AA6
A
228 245Right-handed alpha
Helix 7
AA7
A
262 273Right-handed alpha
Helix 8
AA8
A
274 276Right-handed 310
Helix 9
AA9
A
286 299Right-handed alpha
Helix 10
AB1
A
311 315Right-handed 310
Helix 11
AB2
A
318 323Right-handed alpha
Helix 12
AB3
A
324 327Right-handed 310
Helix 13
AB4
A
341 355Right-handed alpha
Helix 14
AB5
A
361 381Right-handed alpha
Helix 15
AB6
A
387 398Right-handed alpha
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There are 4 sheets in PDB entry 4ZPJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
118 126anti-parallel
Strand 3
A
81 87parallel
Strand 4
A
149 152parallel
Strand 5
A
173 175parallel
Strand 6
A
194 196parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 255first strand
Strand 2
A
220 226parallel
Strand 3
A
278 282parallel
Strand 4
A
307 309parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
416 427anti-parallel
Strand 3
A
405 409anti-parallel
Strand 4
A
399 402anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
416 427anti-parallel
Strand 3
A
433 444anti-parallel
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