Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZPR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZPR entry

There are 4 chains in PDB entry 4ZPR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 87VAL 464
B
 SER 15ASP 349
C
 G 1 T 21
D
 C 1 C 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4ZPR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 116Right-handed alpha
Helix 2
AA2
A
127 140Right-handed alpha
Helix 3
AA3
A
161 173Right-handed alpha
Helix 4
AA4
A
193 198Right-handed alpha
Helix 5
AA5
A
208 213Right-handed 310
Helix 6
AA6
A
218 224Right-handed alpha
Helix 7
AA7
A
379 384Right-handed alpha
Helix 8
AA8
A
387 391Right-handed 310
Helix 9
AA9
A
401 403Right-handed 310
Helix 10
AB1
A
404 416Right-handed alpha
Helix 11
AB2
B
16 43Right-handed alpha
Helix 12
AB3
B
55 73Right-handed alpha
Helix 13
AB4
B
90 96Right-handed alpha
Helix 14
AB5
B
114 119Right-handed 310
Helix 15
AB6
B
123 127Right-handed 310
Helix 16
AB7
B
140 147Right-handed alpha
Helix 17
AB8
B
229 233Right-handed 310
Helix 18
AB9
B
280 297Right-handed alpha
Helix 19
AC1
B
327 330Right-handed 310
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There are 6 sheets in PDB entry 4ZPR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
175 179anti-parallel
Strand 3
A
339 342anti-parallel
Strand 4
A
307 310anti-parallel
Strand 5
A
261 264anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 363first strand
Strand 2
A
454 462anti-parallel
Strand 3
A
365 367anti-parallel
Strand 4
A
373 376anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 363first strand
Strand 2
A
454 462anti-parallel
Strand 3
A
440 447anti-parallel
Strand 4
A
424 426anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
99 103anti-parallel
Strand 3
B
220 225anti-parallel
Strand 4
B
192 197anti-parallel
Strand 5
B
165 169anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 173first strand
Strand 2
B
188 189anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 254first strand
Strand 2
B
242 246anti-parallel
Strand 3
B
331 341anti-parallel
Strand 4
B
314 326anti-parallel
Strand 5
B
305 308anti-parallel
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