Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZQE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZQE entry

There are 2 chains in PDB entry 4ZQE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4GLN 410
B
 THR 4GLY 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4ZQE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
61 63Right-handed 310
Helix 4
AA4
A
64 75Right-handed alpha
Helix 5
AA5
A
83 94Right-handed alpha
Helix 6
AA6
A
105 108Right-handed 310
Helix 7
AA7
A
109 119Right-handed alpha
Helix 8
AA8
A
127 146Right-handed alpha
Helix 9
AA9
A
153 162Right-handed alpha
Helix 10
AB1
A
164 170Right-handed alpha
Helix 11
AB2
A
171 179Right-handed 310
Helix 12
AB3
A
197 204Right-handed alpha
Helix 13
AB4
A
205 211Right-handed alpha
Helix 14
AB5
A
220 228Right-handed alpha
Helix 15
AB6
A
228 243Right-handed alpha
Helix 16
AB7
A
245 247Right-handed 310
Helix 17
AB8
A
279 289Right-handed alpha
Helix 18
AB9
A
301 305Right-handed 310
Helix 19
AC1
A
318 331Right-handed alpha
Helix 20
AC2
A
331 351Right-handed alpha
Helix 21
AC3
A
357 368Right-handed alpha
Helix 22
AC4
A
369 374Right-handed alpha
Helix 23
AC5
A
385 410Right-handed alpha
Helix 24
AC6
B
15 28Right-handed alpha
Helix 25
AC7
B
42 54Right-handed alpha
Helix 26
AC8
B
61 63Right-handed 310
Helix 27
AC9
B
64 75Right-handed alpha
Helix 28
AD1
B
84 94Right-handed alpha
Helix 29
AD2
B
105 108Right-handed 310
Helix 30
AD3
B
109 119Right-handed alpha
Helix 31
AD4
B
127 146Right-handed alpha
Helix 32
AD5
B
153 162Right-handed alpha
Helix 33
AD6
B
164 170Right-handed alpha
Helix 34
AD7
B
171 179Right-handed 310
Helix 35
AD8
B
197 203Right-handed alpha
Helix 36
AD9
B
205 210Right-handed alpha
Helix 37
AE1
B
220 228Right-handed alpha
Helix 38
AE2
B
228 243Right-handed alpha
Helix 39
AE3
B
245 247Right-handed 310
Helix 40
AE4
B
279 289Right-handed alpha
Helix 41
AE5
B
301 305Right-handed 310
Helix 42
AE6
B
318 331Right-handed alpha
Helix 43
AE7
B
331 351Right-handed alpha
Helix 44
AE8
B
355 357Right-handed 310
Helix 45
AE9
B
358 369Right-handed alpha
Helix 46
AF1
B
369 374Right-handed alpha
Helix 47
AF2
B
385 409Right-handed alpha
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There are 3 sheets in PDB entry 4ZQE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
32 38parallel
Strand 3
A
6 11parallel
Strand 4
A
99 102parallel
Strand 5
A
122 125parallel
Strand 6
A
148 151parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 253first strand
Strand 2
A
181 188parallel
Strand 3
A
259 265anti-parallel
Strand 4
A
270 274anti-parallel
Strand 5
B
270 274anti-parallel
Strand 6
B
259 265anti-parallel
Strand 7
B
181 188anti-parallel
Strand 8
B
249 253parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 83first strand
Strand 2
B
57 60parallel
Strand 3
B
32 38parallel
Strand 4
B
6 11parallel
Strand 5
B
99 102parallel
Strand 6
B
122 125parallel
Strand 7
B
148 151parallel
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