Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZQF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZQF entry

There are 2 chains in PDB entry 4ZQF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5ASP 412
B
 LEU 5ASP 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4ZQF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
64 75Right-handed alpha
Helix 4
AA4
A
84 94Right-handed alpha
Helix 5
AA5
A
106 108Right-handed 310
Helix 6
AA6
A
109 119Right-handed alpha
Helix 7
AA7
A
128 146Right-handed alpha
Helix 8
AA8
A
153 162Right-handed alpha
Helix 9
AA9
A
164 170Right-handed alpha
Helix 10
AB1
A
171 179Right-handed 310
Helix 11
AB2
A
190 194Right-handed 310
Helix 12
AB3
A
197 202Right-handed alpha
Helix 13
AB4
A
205 210Right-handed alpha
Helix 14
AB5
A
218 228Right-handed alpha
Helix 15
AB6
A
228 242Right-handed alpha
Helix 16
AB7
A
245 247Right-handed 310
Helix 17
AB8
A
279 289Right-handed alpha
Helix 18
AB9
A
301 305Right-handed 310
Helix 19
AC1
A
318 331Right-handed alpha
Helix 20
AC2
A
331 351Right-handed alpha
Helix 21
AC3
A
357 369Right-handed alpha
Helix 22
AC4
A
369 374Right-handed alpha
Helix 23
AC5
A
385 411Right-handed alpha
Helix 24
AC6
B
15 28Right-handed alpha
Helix 25
AC7
B
42 54Right-handed alpha
Helix 26
AC8
B
64 75Right-handed alpha
Helix 27
AC9
B
84 94Right-handed alpha
Helix 28
AD1
B
106 108Right-handed 310
Helix 29
AD2
B
109 119Right-handed alpha
Helix 30
AD3
B
128 146Right-handed alpha
Helix 31
AD4
B
153 162Right-handed alpha
Helix 32
AD5
B
164 170Right-handed alpha
Helix 33
AD6
B
171 179Right-handed 310
Helix 34
AD7
B
190 194Right-handed 310
Helix 35
AD8
B
197 202Right-handed alpha
Helix 36
AD9
B
205 210Right-handed alpha
Helix 37
AE1
B
218 228Right-handed alpha
Helix 38
AE2
B
228 242Right-handed alpha
Helix 39
AE3
B
245 247Right-handed 310
Helix 40
AE4
B
279 289Right-handed alpha
Helix 41
AE5
B
301 305Right-handed 310
Helix 42
AE6
B
318 331Right-handed alpha
Helix 43
AE7
B
331 351Right-handed alpha
Helix 44
AE8
B
357 369Right-handed alpha
Helix 45
AE9
B
369 374Right-handed alpha
Helix 46
AF1
B
385 411Right-handed alpha
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There are 4 sheets in PDB entry 4ZQF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
57 60parallel
Strand 3
A
32 38parallel
Strand 4
A
6 11parallel
Strand 5
A
99 102parallel
Strand 6
A
122 125parallel
Strand 7
A
148 151parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 253first strand
Strand 2
A
181 188parallel
Strand 3
A
259 265anti-parallel
Strand 4
A
270 274anti-parallel
Strand 5
B
270 274anti-parallel
Strand 6
B
259 265anti-parallel
Strand 7
B
181 188anti-parallel
Strand 8
B
249 253parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
B
307 309anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 83first strand
Strand 2
B
57 60parallel
Strand 3
B
32 38parallel
Strand 4
B
6 11parallel
Strand 5
B
99 102parallel
Strand 6
B
122 125parallel
Strand 7
B
148 151parallel
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