Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZR8 entry

There are 2 chains in PDB entry 4ZR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLY 357
B
 LEU 4GLY 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 4ZR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 14Right-handed alpha
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
48 52Right-handed alpha
Helix 4
AA4
A
52 67Right-handed alpha
Helix 5
AA5
A
79 85Right-handed alpha
Helix 6
AA6
A
105 112Right-handed alpha
Helix 7
AA7
A
116 121Right-handed alpha
Helix 8
AA8
A
121 136Right-handed alpha
Helix 9
AA9
A
147 158Right-handed alpha
Helix 10
AB1
A
164 174Right-handed alpha
Helix 11
AB2
A
174 200Right-handed alpha
Helix 12
AB3
A
210 214Right-handed 310
Helix 13
AB4
A
215 223Right-handed alpha
Helix 14
AB5
A
223 233Right-handed alpha
Helix 15
AB6
A
252 254Right-handed 310
Helix 16
AB7
A
255 261Right-handed alpha
Helix 17
AB8
A
274 283Right-handed alpha
Helix 18
AB9
A
293 299Right-handed 310
Helix 19
AC1
A
300 317Right-handed alpha
Helix 20
AC2
A
339 352Right-handed alpha
Helix 21
AC3
A
352 357Right-handed alpha
Helix 22
AC4
B
7 14Right-handed alpha
Helix 23
AC5
B
33 43Right-handed alpha
Helix 24
AC6
B
45 50Right-handed 310
Helix 25
AC7
B
52 67Right-handed alpha
Helix 26
AC8
B
79 85Right-handed alpha
Helix 27
AC9
B
105 111Right-handed alpha
Helix 28
AD1
B
116 121Right-handed alpha
Helix 29
AD2
B
121 136Right-handed alpha
Helix 30
AD3
B
147 158Right-handed alpha
Helix 31
AD4
B
164 174Right-handed alpha
Helix 32
AD5
B
174 200Right-handed alpha
Helix 33
AD6
B
210 214Right-handed 310
Helix 34
AD7
B
215 223Right-handed alpha
Helix 35
AD8
B
223 233Right-handed alpha
Helix 36
AD9
B
252 254Right-handed 310
Helix 37
AE1
B
255 261Right-handed alpha
Helix 38
AE2
B
274 283Right-handed alpha
Helix 39
AE3
B
293 299Right-handed 310
Helix 40
AE4
B
300 317Right-handed alpha
Helix 41
AE5
B
339 352Right-handed alpha
Helix 42
AE6
B
353 355Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4ZR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
141 146parallel
Strand 3
A
203 207parallel
Strand 4
A
245 248parallel
Strand 5
A
266 268parallel
Strand 6
A
287 292parallel
Strand 7
A
324 328parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
241 242anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
141 146parallel
Strand 3
B
203 207parallel
Strand 4
B
245 248parallel
Strand 5
B
266 268parallel
Strand 6
B
287 292parallel
Strand 7
B
324 328parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 92first strand
Strand 2
B
96 99anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 238first strand
Strand 2
B
241 242anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il