Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZRV entry

There are 3 chains in PDB entry 4ZRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 78ARG 209
B
 ALA 78GLU 208
C
 ALA 78GLU 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4ZRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 110Right-handed alpha
Helix 2
AA2
A
119 130Right-handed alpha
Helix 3
AA3
A
158 162Right-handed 310
Helix 4
AA4
A
171 175Right-handed 310
Helix 5
AA5
B
99 110Right-handed alpha
Helix 6
AA6
B
119 130Right-handed alpha
Helix 7
AA7
B
171 175Right-handed 310
Helix 8
AA8
C
99 110Right-handed alpha
Helix 9
AA9
C
119 130Right-handed alpha
Helix 10
AB1
C
158 162Right-handed 310
Helix 11
AB2
C
171 174Right-handed 310
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There are 6 sheets in PDB entry 4ZRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
201 207anti-parallel
Strand 4
A
136 141parallel
Strand 5
A
150 151anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
201 207anti-parallel
Strand 3
A
136 141parallel
Strand 4
A
178 181anti-parallel
Strand 5
A
191 194anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
89 93anti-parallel
Strand 3
B
201 207anti-parallel
Strand 4
B
136 141parallel
Strand 5
B
150 151anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
201 207anti-parallel
Strand 3
B
136 141parallel
Strand 4
B
178 181anti-parallel
Strand 5
B
191 194anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
84 86first strand
Strand 2
C
89 93anti-parallel
Strand 3
C
201 207anti-parallel
Strand 4
C
136 141parallel
Strand 5
C
150 151anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
113 114first strand
Strand 2
C
201 207anti-parallel
Strand 3
C
136 141parallel
Strand 4
C
176 181anti-parallel
Strand 5
C
191 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il