Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZSX entry

There are 2 chains in PDB entry 4ZSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 295
B
 LYS 3LEU 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 4ZSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
70 72Right-handed 310
Helix 3
AA3
A
73 78Right-handed alpha
Helix 4
AA4
A
80 91Right-handed alpha
Helix 5
AA5
A
104 113Right-handed alpha
Helix 6
AA6
A
116 119Right-handed 310
Helix 7
AA7
A
120 129Right-handed alpha
Helix 8
AA8
A
157 179Right-handed alpha
Helix 9
AA9
A
181 221Right-handed alpha
Helix 10
AB1
A
226 248Right-handed alpha
Helix 11
AB2
A
252 271Right-handed alpha
Helix 12
AB3
A
275 293Right-handed alpha
Helix 13
AB4
B
4 14Right-handed alpha
Helix 14
AB5
B
70 72Right-handed 310
Helix 15
AB6
B
73 78Right-handed alpha
Helix 16
AB7
B
80 92Right-handed alpha
Helix 17
AB8
B
104 113Right-handed alpha
Helix 18
AB9
B
116 119Right-handed 310
Helix 19
AC1
B
120 128Right-handed alpha
Helix 20
AC2
B
157 179Right-handed alpha
Helix 21
AC3
B
181 221Right-handed alpha
Helix 22
AC4
B
226 248Right-handed alpha
Helix 23
AC5
B
252 272Right-handed alpha
Helix 24
AC6
B
275 293Right-handed alpha
Helix 25
AC7
B
294 296Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4ZSX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 29first strand
Strand 2
A
35 42anti-parallel
Strand 3
A
45 53anti-parallel
Strand 4
A
63 67anti-parallel
Strand 5
A
96 100parallel
Strand 6
A
148 153anti-parallel
Strand 7
A
133 138anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 29first strand
Strand 2
B
35 42anti-parallel
Strand 3
B
45 53anti-parallel
Strand 4
B
63 67anti-parallel
Strand 5
B
96 100parallel
Strand 6
B
149 153anti-parallel
Strand 7
B
133 136anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il