Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZV8 entry

There is 1 chain in PDB entry 4ZV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 28HIS 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4ZV8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
50 63Right-handed alpha
Helix 3
AA3
A
79 89Right-handed alpha
Helix 4
AA4
A
91 96Right-handed alpha
Helix 5
AA5
A
104 109Right-handed alpha
Helix 6
AA6
A
117 135Right-handed alpha
Helix 7
AA7
A
139 161Right-handed alpha
Helix 8
AA8
A
167 184Right-handed alpha
Helix 9
AA9
A
192 211Right-handed alpha
Helix 10
AB1
A
211 225Right-handed alpha
Helix 11
AB2
A
229 256Right-handed alpha
Helix 12
AB3
A
263 275Right-handed alpha
Helix 13
AB4
A
284 317Right-handed alpha
Helix 14
AB5
A
317 332Right-handed alpha
Helix 15
AB6
A
339 345Right-handed 310
Helix 16
AB7
A
346 361Right-handed alpha
Helix 17
AB8
A
391 397Right-handed alpha
Helix 18
AB9
A
409 414Right-handed 310
Helix 19
AC1
A
438 456Right-handed alpha
Helix 20
AC2
A
464 468Right-handed 310
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There are 4 sheets in PDB entry 4ZV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
65 70first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
387 390parallel
Strand 4
A
369 370anti-parallel
Strand 5
A
97 98anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
375 377first strand
Strand 2
A
380 382anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
457 460first strand
Strand 2
A
487 490anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
474 475first strand
Strand 2
A
479 480anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il