Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZV9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZV9 entry

There are 11 chains in PDB entry 4ZV9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER -2	PHE 185
A	TYR 187	LEU 294
B	SER 57	PHE 185
B	TYR 187	LEU 294
C	SER 57	PHE 185
C	TYR 187	LEU 294
D	SER 57	PHE 185
D	TYR 187	LEU 294
E	SER 57	PHE 185
E	TYR 187	LEU 294
F	SER 57	VAL 121

There are 54 helices in PDB entry 4ZV9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	111	124	Right-handed alpha
Helix 2	AA2	A	134	138	Right-handed 310
Helix 3	AA3	A	143	154	Right-handed alpha
Helix 4	AA4	A	155	173	Right-handed alpha
Helix 5	AA5	A	186	199	Right-handed alpha
Helix 6	AA6	A	214	221	Right-handed 310
Helix 7	AA7	A	233	238	Right-handed alpha
Helix 8	AA8	A	239	250	Right-handed alpha
Helix 9	AA9	A	275	294	Right-handed alpha
Helix 10	AB1	B	111	124	Right-handed alpha
Helix 11	AB2	B	134	138	Right-handed 310
Helix 12	AB3	B	143	154	Right-handed alpha
Helix 13	AB4	B	155	173	Right-handed alpha
Helix 14	AB5	B	186	199	Right-handed alpha
Helix 15	AB6	B	214	221	Right-handed 310
Helix 16	AB7	B	233	238	Right-handed alpha
Helix 17	AB8	B	239	250	Right-handed alpha
Helix 18	AB9	B	275	294	Right-handed alpha
Helix 19	AC1	C	111	124	Right-handed alpha
Helix 20	AC2	C	134	138	Right-handed 310
Helix 21	AC3	C	143	154	Right-handed alpha
Helix 22	AC4	C	155	173	Right-handed alpha
Helix 23	AC5	C	186	199	Right-handed alpha
Helix 24	AC6	C	214	221	Right-handed 310
Helix 25	AC7	C	233	238	Right-handed alpha
Helix 26	AC8	C	239	250	Right-handed alpha
Helix 27	AC9	C	275	294	Right-handed alpha
Helix 28	AD1	D	111	124	Right-handed alpha
Helix 29	AD2	D	134	138	Right-handed 310
Helix 30	AD3	D	143	154	Right-handed alpha
Helix 31	AD4	D	155	173	Right-handed alpha
Helix 32	AD5	D	186	199	Right-handed alpha
Helix 33	AD6	D	214	221	Right-handed 310
Helix 34	AD7	D	233	238	Right-handed alpha
Helix 35	AD8	D	239	250	Right-handed alpha
Helix 36	AD9	D	275	294	Right-handed alpha
Helix 37	AE1	E	111	124	Right-handed alpha
Helix 38	AE2	E	134	138	Right-handed 310
Helix 39	AE3	E	143	154	Right-handed alpha
Helix 40	AE4	E	155	173	Right-handed alpha
Helix 41	AE5	E	186	199	Right-handed alpha
Helix 42	AE6	E	214	221	Right-handed 310
Helix 43	AE7	E	233	238	Right-handed alpha
Helix 44	AE8	E	239	250	Right-handed alpha
Helix 45	AE9	E	275	294	Right-handed alpha
Helix 46	AF1	F	111	124	Right-handed alpha
Helix 47	AF2	F	134	138	Right-handed 310
Helix 48	AF3	F	143	154	Right-handed alpha
Helix 49	AF4	F	155	172	Right-handed alpha
Helix 50	AF5	F	186	199	Right-handed alpha
Helix 51	AF6	F	214	221	Right-handed 310
Helix 52	AF7	F	233	238	Right-handed alpha
Helix 53	AF8	F	239	250	Right-handed alpha
Helix 54	AF9	F	275	294	Right-handed alpha

There are 12 sheets in PDB entry 4ZV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	77	first strand
Strand 2	A	82	91	anti-parallel
Strand 3	A	127	131	anti-parallel
Strand 4	A	98	104	parallel
Strand 5	A	176	185	parallel
Strand 6	A	204	208	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	230	first strand
Strand 2	A	254	259	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	77	first strand
Strand 2	B	82	91	anti-parallel
Strand 3	B	127	131	anti-parallel
Strand 4	B	98	104	parallel
Strand 5	B	176	185	parallel
Strand 6	B	204	208	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	230	first strand
Strand 2	B	254	259	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	77	first strand
Strand 2	C	82	91	anti-parallel
Strand 3	C	127	131	anti-parallel
Strand 4	C	98	104	parallel
Strand 5	C	176	185	parallel
Strand 6	C	204	208	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	230	first strand
Strand 2	C	254	259	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	77	first strand
Strand 2	D	82	91	anti-parallel
Strand 3	D	127	131	anti-parallel
Strand 4	D	98	104	parallel
Strand 5	D	176	185	parallel
Strand 6	D	204	208	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	230	first strand
Strand 2	D	254	259	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	77	first strand
Strand 2	E	82	91	anti-parallel
Strand 3	E	127	131	anti-parallel
Strand 4	E	98	104	parallel
Strand 5	E	176	185	parallel
Strand 6	E	204	208	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	225	230	first strand
Strand 2	E	254	259	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	77	first strand
Strand 2	F	82	91	anti-parallel
Strand 3	F	127	131	anti-parallel
Strand 4	F	98	104	parallel
Strand 5	F	176	185	parallel
Strand 6	F	204	208	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	225	230	first strand
Strand 2	F	254	259	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZV9

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZV9