Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZY8 entry

There are 4 chains in PDB entry 4ZY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 9SER 168
A
 GLY 10LEU 172
B
 GLY 10SER 168
D
 GLY 10SER 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4ZY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
46 56Right-handed alpha
Helix 2
AA2
C
75 77Right-handed 310
Helix 3
AA3
C
106 113Right-handed alpha
Helix 4
AA4
C
113 135Right-handed alpha
Helix 5
AA5
C
149 162Right-handed alpha
Helix 6
AA6
C
162 167Right-handed alpha
Helix 7
AA7
A
46 55Right-handed alpha
Helix 8
AA8
A
60 65Right-handed 310
Helix 9
AA9
A
75 77Right-handed 310
Helix 10
AB1
A
106 113Right-handed alpha
Helix 11
AB2
A
113 135Right-handed alpha
Helix 12
AB3
A
150 162Right-handed alpha
Helix 13
AB4
A
162 167Right-handed alpha
Helix 14
AB5
B
46 55Right-handed alpha
Helix 15
AB6
B
60 65Right-handed 310
Helix 16
AB7
B
106 113Right-handed alpha
Helix 17
AB8
B
113 135Right-handed alpha
Helix 18
AB9
B
142 149Right-handed alpha
Helix 19
AC1
B
149 162Right-handed alpha
Helix 20
AC2
B
162 168Right-handed alpha
Helix 21
AC3
D
46 55Right-handed alpha
Helix 22
AC4
D
60 65Right-handed 310
Helix 23
AC5
D
75 77Right-handed 310
Helix 24
AC6
D
106 113Right-handed alpha
Helix 25
AC7
D
113 135Right-handed alpha
Helix 26
AC8
D
149 162Right-handed alpha
Helix 27
AC9
D
162 167Right-handed alpha
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There are 4 sheets in PDB entry 4ZY8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 35first strand
Strand 2
C
12 17anti-parallel
Strand 3
C
95 103anti-parallel
Strand 4
C
79 87anti-parallel
Strand 5
C
68 74anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 35first strand
Strand 2
A
12 17anti-parallel
Strand 3
A
95 103anti-parallel
Strand 4
A
79 87anti-parallel
Strand 5
A
67 74anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 35first strand
Strand 2
B
12 17anti-parallel
Strand 3
B
95 103anti-parallel
Strand 4
B
79 87anti-parallel
Strand 5
B
67 74anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 35first strand
Strand 2
D
11 18anti-parallel
Strand 3
D
95 103anti-parallel
Strand 4
D
79 87anti-parallel
Strand 5
D
67 74anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il