Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZYY entry

There is 1 chain in PDB entry 4ZYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 808VAL 1007
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 4ZYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
818 829Right-handed alpha
Helix 2
AA2
A
847 856Right-handed alpha
Helix 3
AA3
A
864 868Right-handed 310
Helix 4
AA4
A
870 885Right-handed alpha
Helix 5
AA5
A
900 907Right-handed alpha
Helix 6
AA6
A
926 935Right-handed alpha
Helix 7
AA7
A
968 993Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4ZYY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
860 862first strand
Strand 2
A
836 842parallel
Strand 3
A
809 814parallel
Strand 4
A
889 892parallel
Strand 5
A
911 915parallel
Strand 6
A
938 945anti-parallel
Strand 7
A
955 962anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
996 998first strand
Strand 2
A
1004 1006anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il