Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZZQ entry

There is 1 chain in PDB entry 4ZZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LYS 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4ZZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 39Right-handed 310
Helix 2
2
A
62 70Right-handed alpha
Helix 3
3
A
163 167Right-handed 310
Helix 4
4
A
240 243Right-handed 310
Helix 5
5
A
333 343Right-handed alpha
Helix 6
6
A
347 352Right-handed alpha
Helix 7
7
A
353 364Right-handed alpha
Helix 8
8
A
380 385Right-handed alpha
Helix 9
9
A
409 417Right-handed alpha
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There are 13 sheets in PDB entry 4ZZQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
71 72parallel
Strand 3
A
41 42anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
125 131anti-parallel
Strand 5
A
285 293anti-parallel
Strand 6
A
302 310anti-parallel
Strand 7
A
315 317anti-parallel
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There are 10 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
13 18parallel
Strand 5
A
26 34anti-parallel
Strand 6
A
105 110anti-parallel
Strand 7
A
366 373anti-parallel
Strand 8
A
140 146anti-parallel
Strand 9
A
211 218anti-parallel
Strand 10
A
221 227anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
125 131anti-parallel
Strand 5
A
285 293anti-parallel
Strand 6
A
302 310anti-parallel
Strand 7
A
331 332anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
366 373parallel
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There are 8 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
13 18parallel
Strand 5
A
26 34anti-parallel
Strand 6
A
105 110anti-parallel
Strand 7
A
366 373anti-parallel
Strand 8
A
118 119parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 317first strand
Strand 2
A
302 310anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
54 55anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
101 103anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
185 186anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
201 202anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
235 238anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
279 280parallel
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