Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZZZ entry

There are 2 chains in PDB entry 4ZZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 662TRP 1014
B
 LYS 664THR 1011
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4ZZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
666 677Right-handed alpha
Helix 2
2
A
678 689Right-handed alpha
Helix 3
3
A
697 701Right-handed 310
Helix 4
4
A
702 722Right-handed alpha
Helix 5
5
A
725 740Right-handed alpha
Helix 6
6
A
754 780Right-handed alpha
Helix 7
7
A
788 796Right-handed alpha
Helix 8
8
A
808 821Right-handed alpha
Helix 9
9
A
843 849Right-handed alpha
Helix 10
10
A
850 854Right-handed 310
Helix 11
11
A
865 867Right-handed 310
Helix 12
12
A
868 876Right-handed alpha
Helix 13
13
A
885 889Right-handed 310
Helix 14
14
A
900 906Right-handed alpha
Helix 15
15
A
907 909Right-handed 310
Helix 16
16
A
993 995Right-handed 310
Helix 17
17
B
666 677Right-handed alpha
Helix 18
18
B
678 689Right-handed alpha
Helix 19
19
B
697 701Right-handed 310
Helix 20
20
B
702 723Right-handed alpha
Helix 21
21
B
725 740Right-handed alpha
Helix 22
22
B
754 780Right-handed alpha
Helix 23
23
B
788 798Right-handed alpha
Helix 24
24
B
808 821Right-handed alpha
Helix 25
25
B
843 849Right-handed alpha
Helix 26
26
B
850 854Right-handed 310
Helix 27
27
B
865 867Right-handed 310
Helix 28
28
B
868 876Right-handed alpha
Helix 29
29
B
885 889Right-handed 310
Helix 30
30
B
900 907Right-handed alpha
Helix 31
31
B
958 961Right-handed 310
Helix 32
32
B
993 995Right-handed 310
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There are 6 sheets in PDB entry 4ZZZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 803first strand
Strand 2
A
829 841anti-parallel
Strand 3
A
997 1009anti-parallel
Strand 4
A
916 925anti-parallel
Strand 5
A
857 864anti-parallel
Strand 6
A
967 969parallel
Strand 7
A
962 964anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
895 897first strand
Strand 2
A
988 991anti-parallel
Strand 3
A
947 950anti-parallel
Strand 4
A
929 932parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
974 976first strand
Strand 2
A
952 956anti-parallel
Strand 3
A
984 986parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
799 803first strand
Strand 2
B
829 841anti-parallel
Strand 3
B
997 1009anti-parallel
Strand 4
B
916 925anti-parallel
Strand 5
B
857 864anti-parallel
Strand 6
B
967 969parallel
Strand 7
B
962 964anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
895 897first strand
Strand 2
B
988 991anti-parallel
Strand 3
B
947 950anti-parallel
Strand 4
B
929 932parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
974 976first strand
Strand 2
B
952 956anti-parallel
Strand 3
B
984 986parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il