Analysis of interatomic Contacts of Structural Units in PDB entry:
5A0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A0L entry

There are 2 chains in PDB entry 5A0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 66PRO 270
B
 THR 66PRO 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5A0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
134 142Right-handed alpha
Helix 2
2
A
151 166Right-handed alpha
Helix 3
3
A
179 196Right-handed alpha
Helix 4
4
A
202 206Right-handed 310
Helix 5
5
A
207 213Right-handed alpha
Helix 6
6
A
217 233Right-handed alpha
Helix 7
7
A
235 240Right-handed alpha
Helix 8
8
B
134 142Right-handed alpha
Helix 9
9
B
151 166Right-handed alpha
Helix 10
10
B
179 196Right-handed alpha
Helix 11
11
B
202 206Right-handed 310
Helix 12
12
B
207 213Right-handed alpha
Helix 13
13
B
217 233Right-handed alpha
Helix 14
14
B
235 240Right-handed alpha
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There are 2 sheets in PDB entry 5A0L. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
126 132anti-parallel
Strand 3
A
251 255anti-parallel
Strand 4
A
263 265anti-parallel
Strand 5
A
105 109anti-parallel
Strand 6
A
95 99anti-parallel
Strand 7
A
79 83anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 83first strand
Strand 2
B
126 132anti-parallel
Strand 3
B
251 255anti-parallel
Strand 4
B
263 265anti-parallel
Strand 5
B
105 109anti-parallel
Strand 6
B
95 99anti-parallel
Strand 7
B
79 83anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il