Analysis of interatomic Contacts of Structural Units in PDB entry:
5A0Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5A0Z entry

There are 4 chains in PDB entry 5A0Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 337	PHE 1128
B	MET 337	PHE 1128
C	MET 337	PHE 1128
D	MET 337	PHE 1128

There are138 helices in PDB entry 5A0Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	341	352	Right-handed alpha
Helix 2	2	A	360	372	Right-handed alpha
Helix 3	3	A	377	392	Right-handed alpha
Helix 4	4	A	422	429	Right-handed alpha
Helix 5	5	A	443	454	Right-handed alpha
Helix 6	6	A	454	459	Right-handed alpha
Helix 7	7	A	462	475	Right-handed alpha
Helix 8	8	A	477	483	Right-handed alpha
Helix 9	9	A	489	494	Right-handed alpha
Helix 10	10	A	506	525	Right-handed alpha
Helix 11	11	A	533	568	Right-handed alpha
Helix 12	12	A	570	587	Right-handed alpha
Helix 13	13	A	594	608	Right-handed alpha
Helix 14	14	A	608	613	Right-handed alpha
Helix 15	15	A	628	638	Right-handed alpha
Helix 16	16	A	641	659	Right-handed alpha
Helix 17	17	A	664	671	Right-handed alpha
Helix 18	18	A	694	708	Right-handed alpha
Helix 19	19	A	723	735	Right-handed alpha
Helix 20	20	A	746	757	Right-handed alpha
Helix 21	21	A	759	765	Right-handed alpha
Helix 22	22	A	791	800	Right-handed alpha
Helix 23	23	A	823	857	Right-handed alpha
Helix 24	24	A	859	865	Right-handed alpha
Helix 25	25	A	868	873	Right-handed alpha
Helix 26	26	A	897	904	Right-handed alpha
Helix 27	27	A	915	923	Right-handed alpha
Helix 28	28	A	953	967	Right-handed alpha
Helix 29	29	A	988	992	Right-handed 310
Helix 30	30	A	1019	1024	Right-handed alpha
Helix 31	31	A	1052	1070	Right-handed alpha
Helix 32	32	A	1083	1090	Right-handed alpha
Helix 33	33	A	1112	1117	Right-handed alpha
Helix 34	34	B	341	354	Right-handed alpha
Helix 35	35	B	360	373	Right-handed alpha
Helix 36	36	B	377	391	Right-handed alpha
Helix 37	37	B	422	428	Right-handed alpha
Helix 38	38	B	443	454	Right-handed alpha
Helix 39	39	B	454	459	Right-handed alpha
Helix 40	40	B	462	475	Right-handed alpha
Helix 41	41	B	476	481	Right-handed alpha
Helix 42	42	B	488	494	Right-handed alpha
Helix 43	43	B	506	526	Right-handed alpha
Helix 44	44	B	533	566	Right-handed alpha
Helix 45	45	B	570	587	Right-handed alpha
Helix 46	46	B	594	613	Right-handed alpha
Helix 47	47	B	623	637	Right-handed alpha
Helix 48	48	B	641	657	Right-handed alpha
Helix 49	49	B	664	669	Right-handed alpha
Helix 50	50	B	694	708	Right-handed alpha
Helix 51	51	B	723	735	Right-handed alpha
Helix 52	52	B	746	756	Right-handed alpha
Helix 53	53	B	759	765	Right-handed alpha
Helix 54	54	B	793	798	Right-handed alpha
Helix 55	55	B	828	857	Right-handed alpha
Helix 56	56	B	859	865	Right-handed alpha
Helix 57	57	B	868	873	Right-handed alpha
Helix 58	58	B	893	899	Right-handed alpha
Helix 59	59	B	901	908	Right-handed alpha
Helix 60	60	B	917	924	Right-handed alpha
Helix 61	61	B	930	938	Right-handed alpha
Helix 62	62	B	953	966	Right-handed alpha
Helix 63	63	B	985	990	Right-handed alpha
Helix 64	64	B	1052	1070	Right-handed alpha
Helix 65	65	B	1082	1090	Right-handed alpha
Helix 66	66	B	1109	1111	Right-handed 310
Helix 67	67	B	1112	1122	Right-handed alpha
Helix 68	68	C	341	352	Right-handed alpha
Helix 69	69	C	361	371	Right-handed alpha
Helix 70	70	C	377	392	Right-handed alpha
Helix 71	71	C	422	428	Right-handed alpha
Helix 72	72	C	431	435	Right-handed 310
Helix 73	73	C	443	453	Right-handed alpha
Helix 74	74	C	454	459	Right-handed alpha
Helix 75	75	C	462	474	Right-handed alpha
Helix 76	76	C	476	481	Right-handed alpha
Helix 77	77	C	506	525	Right-handed alpha
Helix 78	78	C	530	567	Right-handed alpha
Helix 79	79	C	570	587	Right-handed alpha
Helix 80	80	C	594	613	Right-handed alpha
Helix 81	81	C	622	627	Right-handed alpha
Helix 82	82	C	627	637	Right-handed alpha
Helix 83	83	C	641	659	Right-handed alpha
Helix 84	84	C	664	671	Right-handed alpha
Helix 85	85	C	694	708	Right-handed alpha
Helix 86	86	C	723	736	Right-handed alpha
Helix 87	87	C	746	756	Right-handed alpha
Helix 88	88	C	759	765	Right-handed alpha
Helix 89	89	C	791	800	Right-handed alpha
Helix 90	90	C	834	857	Right-handed alpha
Helix 91	91	C	861	865	Right-handed 310
Helix 92	92	C	868	873	Right-handed alpha
Helix 93	93	C	894	903	Right-handed alpha
Helix 94	94	C	916	925	Right-handed alpha
Helix 95	95	C	931	936	Right-handed alpha
Helix 96	96	C	953	966	Right-handed alpha
Helix 97	97	C	987	992	Right-handed 310
Helix 98	98	C	1019	1026	Right-handed alpha
Helix 99	99	C	1052	1070	Right-handed alpha
Helix 100	100	C	1080	1090	Right-handed alpha
Helix 101	101	C	1091	1094	Right-handed 310
Helix 102	102	C	1113	1120	Right-handed alpha
Helix 103	103	D	341	354	Right-handed alpha
Helix 104	104	D	360	373	Right-handed alpha
Helix 105	105	D	377	392	Right-handed alpha
Helix 106	106	D	422	428	Right-handed alpha
Helix 107	107	D	429	432	Right-handed 310
Helix 108	108	D	443	453	Right-handed alpha
Helix 109	109	D	454	459	Right-handed alpha
Helix 110	110	D	462	475	Right-handed alpha
Helix 111	111	D	476	482	Right-handed alpha
Helix 112	112	D	488	494	Right-handed alpha
Helix 113	113	D	506	524	Right-handed alpha
Helix 114	114	D	533	568	Right-handed alpha
Helix 115	115	D	570	587	Right-handed alpha
Helix 116	116	D	594	613	Right-handed alpha
Helix 117	117	D	623	637	Right-handed alpha
Helix 118	118	D	641	659	Right-handed alpha
Helix 119	119	D	666	671	Right-handed alpha
Helix 120	120	D	694	708	Right-handed alpha
Helix 121	121	D	723	736	Right-handed alpha
Helix 122	122	D	746	756	Right-handed alpha
Helix 123	123	D	759	765	Right-handed alpha
Helix 124	124	D	792	800	Right-handed alpha
Helix 125	125	D	819	823	Right-handed 310
Helix 126	126	D	823	828	Right-handed 310
Helix 127	127	D	830	857	Right-handed alpha
Helix 128	128	D	861	865	Right-handed 310
Helix 129	129	D	868	873	Right-handed alpha
Helix 130	130	D	875	879	Right-handed 310
Helix 131	131	D	893	901	Right-handed alpha
Helix 132	132	D	951	956	Right-handed 310
Helix 133	133	D	957	966	Right-handed alpha
Helix 134	134	D	1021	1025	Right-handed 310
Helix 135	135	D	1052	1070	Right-handed alpha
Helix 136	136	D	1084	1090	Right-handed alpha
Helix 137	137	D	1109	1111	Right-handed 310
Helix 138	138	D	1115	1120	Right-handed alpha

There are 23 sheets in PDB entry 5A0Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, A, DB, C, DD, DE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	359	first strand
Strand 2	A	413	415	parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	487	first strand
Strand 2	A	788	790	anti-parallel
Strand 3	A	890	892	parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	679	683	first strand
Strand 2	A	713	718	parallel
Strand 3	A	742	745	parallel
Strand 4	A	1073	1078	anti-parallel
Strand 5	A	1041	1045	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	769	first strand
Strand 2	A	773	775	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	782	first strand
Strand 2	A	884	885	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1098	1100	first strand
Strand 2	A	1105	1107	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	359	first strand
Strand 2	B	413	415	parallel

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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	621	622	first strand
Strand 2	B	679	683	parallel
Strand 3	B	713	718	parallel
Strand 4	B	742	745	parallel
Strand 5	B	1073	1074	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	767	769	first strand
Strand 2	B	773	775	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	790	first strand
Strand 2	B	888	892	parallel
Strand 3	B	976	978	parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	803	804	first strand
Strand 2	B	809	810	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1043	1044	first strand
Strand 2	B	1076	1077	parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1098	1100	first strand
Strand 2	B	1105	1107	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	359	first strand
Strand 2	C	413	415	parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	679	683	first strand
Strand 2	C	713	718	parallel
Strand 3	C	742	745	parallel
Strand 4	C	1073	1075	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	767	768	first strand
Strand 2	C	774	775	anti-parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	787	789	first strand
Strand 2	C	888	891	parallel
Strand 3	C	976	978	parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1098	1100	first strand
Strand 2	C	1105	1107	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	359	first strand
Strand 2	D	413	415	parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	621	622	first strand
Strand 2	D	679	683	parallel
Strand 3	D	713	718	parallel
Strand 4	D	742	745	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	767	769	first strand
Strand 2	D	773	775	anti-parallel

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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	787	789	first strand
Strand 2	D	888	891	parallel
Strand 3	D	976	978	parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1098	1101	first strand
Strand 2	D	1104	1107	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5A0Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
5A0Z