Analysis of interatomic Contacts of Structural Units in PDB entry:
5A15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A15 entry

There are 15 chains in PDB entry 5A15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 23PRO 124
B
 PHE 23PRO 124
C
 PHE 23PRO 124
D
 PHE 23PRO 124
E
 PHE 23PRO 124
F
 PHE 23PRO 124
G
 PHE 23PRO 124
H
 PHE 23PRO 124
I
 PHE 23PRO 124
J
 PHE 23PRO 124
K
 PHE 23PRO 124
L
 PHE 23PRO 124
M
 PHE 23PRO 124
N
 PHE 23PRO 124
O
 PHE 23PRO 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 5A15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 44Right-handed alpha
Helix 2
2
A
49 56Right-handed alpha
Helix 3
3
A
81 92Right-handed alpha
Helix 4
4
A
102 113Right-handed alpha
Helix 5
5
A
115 122Right-handed alpha
Helix 6
6
B
40 44Right-handed alpha
Helix 7
7
B
49 56Right-handed alpha
Helix 8
8
B
81 92Right-handed alpha
Helix 9
9
B
102 113Right-handed alpha
Helix 10
10
B
115 123Right-handed alpha
Helix 11
11
C
40 44Right-handed alpha
Helix 12
12
C
49 56Right-handed alpha
Helix 13
13
C
81 92Right-handed alpha
Helix 14
14
C
102 113Right-handed alpha
Helix 15
15
C
115 123Right-handed alpha
Helix 16
16
D
40 44Right-handed alpha
Helix 17
17
D
49 56Right-handed alpha
Helix 18
18
D
81 92Right-handed alpha
Helix 19
19
D
102 113Right-handed alpha
Helix 20
20
D
115 123Right-handed alpha
Helix 21
21
E
40 44Right-handed alpha
Helix 22
22
E
49 56Right-handed alpha
Helix 23
23
E
81 92Right-handed alpha
Helix 24
24
E
102 113Right-handed alpha
Helix 25
25
E
115 123Right-handed alpha
Helix 26
26
F
40 44Right-handed alpha
Helix 27
27
F
49 56Right-handed alpha
Helix 28
28
F
81 92Right-handed alpha
Helix 29
29
F
102 113Right-handed alpha
Helix 30
30
F
115 123Right-handed alpha
Helix 31
31
G
40 44Right-handed alpha
Helix 32
32
G
49 56Right-handed alpha
Helix 33
33
G
81 92Right-handed alpha
Helix 34
34
G
102 114Right-handed alpha
Helix 35
35
G
115 123Right-handed alpha
Helix 36
36
H
40 44Right-handed alpha
Helix 37
37
H
49 56Right-handed alpha
Helix 38
38
H
81 92Right-handed alpha
Helix 39
39
H
102 113Right-handed alpha
Helix 40
40
H
115 123Right-handed alpha
Helix 41
41
I
40 44Right-handed alpha
Helix 42
42
I
49 56Right-handed alpha
Helix 43
43
I
78 92Right-handed alpha
Helix 44
44
I
102 113Right-handed alpha
Helix 45
45
I
115 123Right-handed alpha
Helix 46
46
J
40 44Right-handed alpha
Helix 47
47
J
49 56Right-handed alpha
Helix 48
48
J
78 92Right-handed alpha
Helix 49
49
J
102 113Right-handed alpha
Helix 50
50
J
115 123Right-handed alpha
Helix 51
51
K
40 44Right-handed alpha
Helix 52
52
K
49 56Right-handed alpha
Helix 53
53
K
81 92Right-handed alpha
Helix 54
54
K
102 113Right-handed alpha
Helix 55
55
K
115 123Right-handed alpha
Helix 56
56
L
40 44Right-handed alpha
Helix 57
57
L
49 56Right-handed alpha
Helix 58
58
L
81 92Right-handed alpha
Helix 59
59
L
102 113Right-handed alpha
Helix 60
60
L
115 123Right-handed alpha
Helix 61
61
M
40 44Right-handed alpha
Helix 62
62
M
49 56Right-handed alpha
Helix 63
63
M
81 92Right-handed alpha
Helix 64
64
M
102 113Right-handed alpha
Helix 65
65
M
115 123Right-handed alpha
Helix 66
66
N
40 44Right-handed alpha
Helix 67
67
N
49 56Right-handed alpha
Helix 68
68
N
81 92Right-handed alpha
Helix 69
69
N
102 113Right-handed alpha
Helix 70
70
N
115 123Right-handed alpha
Helix 71
71
O
40 44Right-handed alpha
Helix 72
72
O
49 56Right-handed alpha
Helix 73
73
O
78 92Right-handed alpha
Helix 74
74
O
102 113Right-handed alpha
Helix 75
75
O
115 123Right-handed alpha
Back to top of page

There are 15 sheets in PDB entry 5A15. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA, IA, JA, KA, LA, MA, NA, OA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 39first strand
Strand 2
B
26 31anti-parallel
Strand 3
B
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 39first strand
Strand 2
C
26 31anti-parallel
Strand 3
C
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 39first strand
Strand 2
D
26 31anti-parallel
Strand 3
D
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
34 39first strand
Strand 2
E
26 31anti-parallel
Strand 3
E
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
34 39first strand
Strand 2
F
26 31anti-parallel
Strand 3
F
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
34 39first strand
Strand 2
G
26 31anti-parallel
Strand 3
G
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
34 39first strand
Strand 2
H
26 31anti-parallel
Strand 3
H
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
34 39first strand
Strand 2
I
26 31anti-parallel
Strand 3
I
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
34 39first strand
Strand 2
J
26 31anti-parallel
Strand 3
J
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
34 39first strand
Strand 2
K
26 31anti-parallel
Strand 3
K
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
34 39first strand
Strand 2
L
26 31anti-parallel
Strand 3
L
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
34 39first strand
Strand 2
M
26 31anti-parallel
Strand 3
M
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in NA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
34 39first strand
Strand 2
N
26 31anti-parallel
Strand 3
N
73 75parallel
Back to list of sheets
Back to top of page

There are 3 strands in OA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
34 39first strand
Strand 2
O
26 31anti-parallel
Strand 3
O
73 75parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il