Analysis of interatomic Contacts of Structural Units in PDB entry:
5A22

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5A22 entry

There is 1 chain in PDB entry 5A22 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 35	ASP 2109

There are 84 helices in PDB entry 5A22. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	47	58	Right-handed alpha
Helix 2	2	A	65	69	Right-handed 310
Helix 3	3	A	71	81	Right-handed alpha
Helix 4	4	A	88	99	Right-handed alpha
Helix 5	5	A	106	135	Right-handed alpha
Helix 6	6	A	148	172	Right-handed alpha
Helix 7	7	A	175	186	Right-handed alpha
Helix 8	8	A	228	250	Right-handed alpha
Helix 9	9	A	257	278	Right-handed alpha
Helix 10	10	A	279	281	Right-handed 310
Helix 11	11	A	282	304	Right-handed alpha
Helix 12	12	A	311	329	Right-handed alpha
Helix 13	13	A	331	342	Right-handed alpha
Helix 14	14	A	344	355	Right-handed alpha
Helix 15	15	A	364	378	Right-handed alpha
Helix 16	16	A	384	406	Right-handed alpha
Helix 17	17	A	420	428	Right-handed alpha
Helix 18	18	A	433	440	Right-handed alpha
Helix 19	19	A	460	464	Right-handed 310
Helix 20	20	A	473	483	Right-handed alpha
Helix 21	21	A	493	501	Right-handed alpha
Helix 22	22	A	505	517	Right-handed alpha
Helix 23	23	A	519	522	Right-handed 310
Helix 24	24	A	545	563	Right-handed alpha
Helix 25	25	A	564	567	Right-handed 310
Helix 26	26	A	576	584	Right-handed alpha
Helix 27	27	A	593	595	Right-handed 310
Helix 28	28	A	608	613	Right-handed alpha
Helix 29	29	A	614	629	Right-handed alpha
Helix 30	30	A	634	636	Right-handed 310
Helix 31	31	A	637	645	Right-handed alpha
Helix 32	32	A	652	656	Right-handed 310
Helix 33	33	A	684	700	Right-handed alpha
Helix 34	34	A	730	758	Right-handed alpha
Helix 35	35	A	789	797	Right-handed alpha
Helix 36	36	A	807	826	Right-handed alpha
Helix 37	37	A	830	850	Right-handed alpha
Helix 38	38	A	870	880	Right-handed alpha
Helix 39	39	A	902	918	Right-handed alpha
Helix 40	40	A	921	932	Right-handed alpha
Helix 41	41	A	939	949	Right-handed alpha
Helix 42	42	A	960	976	Right-handed alpha
Helix 43	43	A	982	1005	Right-handed alpha
Helix 44	44	A	1010	1021	Right-handed alpha
Helix 45	45	A	1023	1033	Right-handed alpha
Helix 46	46	A	1034	1042	Right-handed alpha
Helix 47	47	A	1043	1045	Right-handed 310
Helix 48	48	A	1048	1070	Right-handed alpha
Helix 49	49	A	1081	1094	Right-handed alpha
Helix 50	50	A	1105	1111	Right-handed alpha
Helix 51	51	A	1174	1186	Right-handed alpha
Helix 52	52	A	1195	1209	Right-handed alpha
Helix 53	53	A	1243	1250	Right-handed alpha
Helix 54	54	A	1268	1285	Right-handed alpha
Helix 55	55	A	1323	1331	Right-handed alpha
Helix 56	56	A	1359	1377	Right-handed alpha
Helix 57	57	A	1397	1420	Right-handed alpha
Helix 58	58	A	1427	1446	Right-handed alpha
Helix 59	59	A	1446	1455	Right-handed alpha
Helix 60	60	A	1457	1465	Right-handed alpha
Helix 61	61	A	1476	1498	Right-handed alpha
Helix 62	62	A	1515	1533	Right-handed alpha
Helix 63	63	A	1540	1556	Right-handed alpha
Helix 64	64	A	1633	1640	Right-handed alpha
Helix 65	65	A	1647	1659	Right-handed alpha
Helix 66	66	A	1674	1684	Right-handed alpha
Helix 67	67	A	1710	1717	Right-handed 310
Helix 68	68	A	1728	1732	Right-handed 310
Helix 69	69	A	1740	1753	Right-handed alpha
Helix 70	70	A	1767	1782	Right-handed alpha
Helix 71	71	A	1783	1785	Right-handed 310
Helix 72	72	A	1797	1804	Right-handed alpha
Helix 73	73	A	1806	1811	Right-handed alpha
Helix 74	74	A	1850	1862	Right-handed alpha
Helix 75	75	A	1867	1881	Right-handed alpha
Helix 76	76	A	1896	1906	Right-handed alpha
Helix 77	77	A	1909	1923	Right-handed alpha
Helix 78	78	A	1927	1944	Right-handed alpha
Helix 79	79	A	1958	1980	Right-handed alpha
Helix 80	80	A	1981	1994	Right-handed alpha
Helix 81	81	A	2029	2045	Right-handed alpha
Helix 82	82	A	2053	2065	Right-handed alpha
Helix 83	83	A	2069	2075	Right-handed alpha
Helix 84	84	A	2079	2083	Right-handed 310

There are 8 sheets in PDB entry 5A22. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	193	first strand
Strand 2	A	197	204	anti-parallel
Strand 3	A	208	213	anti-parallel
Strand 4	A	216	219	anti-parallel
Strand 5	A	224	227	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	543	first strand
Strand 2	A	524	528	anti-parallel
Strand 3	A	646	649	parallel
Strand 4	A	672	674	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	712	first strand
Strand 2	A	715	723	anti-parallel
Strand 3	A	597	604	anti-parallel
Strand 4	A	768	769	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	657	659	first strand
Strand 2	A	662	664	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	774	776	first strand
Strand 2	A	779	782	anti-parallel
Strand 3	A	785	786	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1114	1115	first strand
Strand 2	A	1291	1295	anti-parallel
Strand 3	A	1131	1135	anti-parallel
Strand 4	A	1251	1253	anti-parallel

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There are 7 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1608	1613	first strand
Strand 2	A	1815	1822	anti-parallel
Strand 3	A	1832	1837	anti-parallel
Strand 4	A	1791	1796	anti-parallel
Strand 5	A	1758	1761	parallel
Strand 6	A	1665	1669	parallel
Strand 7	A	1688	1692	parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2012	2014	first strand
Strand 2	A	1999	2001	anti-parallel
Strand 3	A	2020	2021	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5A22

Analysis of interatomic Contacts of Structural Units in PDB entry:
5A22