Analysis of interatomic Contacts of Structural Units in PDB entry:
5A34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A34 entry

There are 8 chains in PDB entry 5A34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3SER 170
B
 ASP 107LYS 320
C
 ALA 2THR 171
D
 SER 110LYS 320
E
 THR 3VAL 169
F
 ASP 107LYS 320
G
 ALA 2VAL 169
H
 SER 110PHE 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 5A34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 25Right-handed alpha
Helix 2
2
A
50 62Right-handed alpha
Helix 3
3
A
71 87Right-handed alpha
Helix 4
4
A
94 106Right-handed alpha
Helix 5
5
A
118 130Right-handed alpha
Helix 6
6
A
131 141Right-handed alpha
Helix 7
7
A
144 156Right-handed alpha
Helix 8
8
A
157 168Right-handed alpha
Helix 9
9
B
132 146Right-handed alpha
Helix 10
10
B
162 167Right-handed alpha
Helix 11
11
B
209 220Right-handed alpha
Helix 12
12
B
226 243Right-handed alpha
Helix 13
13
B
248 266Right-handed alpha
Helix 14
14
B
275 287Right-handed alpha
Helix 15
15
B
296 309Right-handed alpha
Helix 16
16
B
309 320Right-handed alpha
Helix 17
17
C
14 25Right-handed alpha
Helix 18
18
C
50 62Right-handed alpha
Helix 19
19
C
63 66Right-handed 310
Helix 20
20
C
71 87Right-handed alpha
Helix 21
21
C
94 107Right-handed alpha
Helix 22
22
C
118 131Right-handed alpha
Helix 23
23
C
131 138Right-handed alpha
Helix 24
24
C
144 157Right-handed alpha
Helix 25
25
C
157 168Right-handed alpha
Helix 26
26
D
132 144Right-handed alpha
Helix 27
27
D
162 167Right-handed alpha
Helix 28
28
D
209 220Right-handed alpha
Helix 29
29
D
226 243Right-handed alpha
Helix 30
30
D
248 266Right-handed alpha
Helix 31
31
D
275 287Right-handed alpha
Helix 32
32
D
296 309Right-handed alpha
Helix 33
33
D
309 320Right-handed alpha
Helix 34
34
E
14 25Right-handed alpha
Helix 35
35
E
50 62Right-handed alpha
Helix 36
36
E
63 66Right-handed 310
Helix 37
37
E
71 87Right-handed alpha
Helix 38
38
E
88 91Right-handed 310
Helix 39
39
E
94 107Right-handed alpha
Helix 40
40
E
118 130Right-handed alpha
Helix 41
41
E
131 140Right-handed alpha
Helix 42
42
E
144 157Right-handed alpha
Helix 43
43
E
157 168Right-handed alpha
Helix 44
44
F
132 143Right-handed alpha
Helix 45
45
F
162 167Right-handed alpha
Helix 46
46
F
209 220Right-handed alpha
Helix 47
47
F
226 243Right-handed alpha
Helix 48
48
F
248 264Right-handed alpha
Helix 49
49
F
275 288Right-handed alpha
Helix 50
50
F
296 308Right-handed alpha
Helix 51
51
F
309 318Right-handed alpha
Helix 52
52
G
14 25Right-handed alpha
Helix 53
53
G
50 62Right-handed alpha
Helix 54
54
G
63 66Right-handed 310
Helix 55
55
G
71 87Right-handed alpha
Helix 56
56
G
94 107Right-handed alpha
Helix 57
57
G
118 130Right-handed alpha
Helix 58
58
G
131 140Right-handed alpha
Helix 59
59
G
144 156Right-handed alpha
Helix 60
60
G
157 168Right-handed alpha
Helix 61
61
H
133 146Right-handed alpha
Helix 62
62
H
162 167Right-handed alpha
Helix 63
63
H
209 220Right-handed alpha
Helix 64
64
H
226 243Right-handed alpha
Helix 65
65
H
248 263Right-handed alpha
Helix 66
66
H
275 287Right-handed alpha
Helix 67
67
H
296 308Right-handed alpha
Helix 68
68
H
309 319Right-handed alpha
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There are 8 sheets in PDB entry 5A34. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
4 7parallel
Strand 3
A
39 43anti-parallel
Strand 4
A
46 48anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 154first strand
Strand 2
B
183 189parallel
Strand 3
B
121 126parallel
Strand 4
B
196 198anti-parallel
Strand 5
B
207 208anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
5 7parallel
Strand 3
C
39 43anti-parallel
Strand 4
C
46 48anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 154first strand
Strand 2
D
183 189parallel
Strand 3
D
121 126parallel
Strand 4
D
196 198anti-parallel
Strand 5
D
207 208anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 33first strand
Strand 2
E
4 7parallel
Strand 3
E
39 43anti-parallel
Strand 4
E
46 48anti-parallel
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There are 5 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
148 154first strand
Strand 2
F
183 189parallel
Strand 3
F
121 126parallel
Strand 4
F
196 198anti-parallel
Strand 5
F
207 208anti-parallel
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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
30 35first strand
Strand 2
G
4 9parallel
Strand 3
G
39 43anti-parallel
Strand 4
G
46 48anti-parallel
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There are 5 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
148 154first strand
Strand 2
H
183 189parallel
Strand 3
H
121 126parallel
Strand 4
H
196 198anti-parallel
Strand 5
H
207 208anti-parallel
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