Analysis of interatomic Contacts of Structural Units in PDB entry:
5A3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A3F entry

There are 3 chains in PDB entry 5A3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 6ILE 735
B
 MET 6GLY 733
C
 MET 6GLU 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 5A3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
43 53Right-handed alpha
Helix 3
3
A
93 110Right-handed alpha
Helix 4
4
A
151 165Right-handed alpha
Helix 5
5
A
184 194Right-handed alpha
Helix 6
6
A
206 210Right-handed 310
Helix 7
7
A
247 262Right-handed alpha
Helix 8
8
A
265 269Right-handed 310
Helix 9
9
A
273 312Right-handed alpha
Helix 10
10
A
321 346Right-handed alpha
Helix 11
11
A
357 368Right-handed alpha
Helix 12
12
A
368 377Right-handed alpha
Helix 13
13
A
380 397Right-handed alpha
Helix 14
14
A
405 419Right-handed alpha
Helix 15
15
A
420 443Right-handed alpha
Helix 16
16
A
449 485Right-handed alpha
Helix 17
17
A
605 619Right-handed alpha
Helix 18
18
A
642 679Right-handed alpha
Helix 19
19
A
679 699Right-handed alpha
Helix 20
20
A
700 705Right-handed alpha
Helix 21
21
A
708 732Right-handed alpha
Helix 22
22
B
9 22Right-handed alpha
Helix 23
23
B
43 53Right-handed alpha
Helix 24
24
B
93 109Right-handed alpha
Helix 25
25
B
151 165Right-handed alpha
Helix 26
26
B
180 183Right-handed 310
Helix 27
27
B
184 194Right-handed alpha
Helix 28
28
B
206 210Right-handed 310
Helix 29
29
B
216 221Right-handed alpha
Helix 30
30
B
247 262Right-handed alpha
Helix 31
31
B
265 272Right-handed 310
Helix 32
32
B
273 312Right-handed alpha
Helix 33
33
B
322 346Right-handed alpha
Helix 34
34
B
357 368Right-handed alpha
Helix 35
35
B
368 378Right-handed alpha
Helix 36
36
B
380 392Right-handed alpha
Helix 37
37
B
405 419Right-handed alpha
Helix 38
38
B
420 443Right-handed alpha
Helix 39
39
B
444 447Right-handed 310
Helix 40
40
B
449 485Right-handed alpha
Helix 41
41
B
643 679Right-handed alpha
Helix 42
42
B
679 699Right-handed alpha
Helix 43
43
B
700 705Right-handed alpha
Helix 44
44
B
708 733Right-handed alpha
Helix 45
45
C
9 23Right-handed alpha
Helix 46
46
C
43 53Right-handed alpha
Helix 47
47
C
93 110Right-handed alpha
Helix 48
48
C
151 165Right-handed alpha
Helix 49
49
C
184 194Right-handed alpha
Helix 50
50
C
206 210Right-handed 310
Helix 51
51
C
247 262Right-handed alpha
Helix 52
52
C
265 269Right-handed 310
Helix 53
53
C
273 312Right-handed alpha
Helix 54
54
C
321 346Right-handed alpha
Helix 55
55
C
357 368Right-handed alpha
Helix 56
56
C
368 377Right-handed alpha
Helix 57
57
C
380 397Right-handed alpha
Helix 58
58
C
405 419Right-handed alpha
Helix 59
59
C
420 443Right-handed alpha
Helix 60
60
C
449 485Right-handed alpha
Helix 61
61
C
605 620Right-handed alpha
Helix 62
62
C
642 679Right-handed alpha
Helix 63
63
C
679 699Right-handed alpha
Helix 64
64
C
700 705Right-handed alpha
Helix 65
65
C
708 732Right-handed alpha
Helix 66
66
D
9 22Right-handed alpha
Helix 67
67
D
43 53Right-handed alpha
Helix 68
68
D
93 109Right-handed alpha
Helix 69
69
D
151 165Right-handed alpha
Helix 70
70
D
180 183Right-handed 310
Helix 71
71
D
184 194Right-handed alpha
Helix 72
72
D
206 210Right-handed 310
Helix 73
73
D
216 221Right-handed alpha
Helix 74
74
D
247 262Right-handed alpha
Helix 75
75
D
265 272Right-handed 310
Helix 76
76
D
273 312Right-handed alpha
Helix 77
77
D
323 346Right-handed alpha
Helix 78
78
D
357 368Right-handed alpha
Helix 79
79
D
368 378Right-handed alpha
Helix 80
80
D
380 392Right-handed alpha
Helix 81
81
D
405 419Right-handed alpha
Helix 82
82
D
420 443Right-handed alpha
Helix 83
83
D
444 447Right-handed 310
Helix 84
84
D
449 485Right-handed alpha
Helix 85
85
D
643 679Right-handed alpha
Helix 86
86
D
679 699Right-handed alpha
Helix 87
87
D
700 705Right-handed alpha
Helix 88
88
D
708 733Right-handed alpha
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There are 6 sheets in PDB entry 5A3F. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, CB, A,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
120 126anti-parallel
Strand 3
A
69 75parallel
Strand 4
A
132 136anti-parallel
Strand 5
A
33 38parallel
Strand 6
A
169 176parallel
Strand 7
A
200 205parallel
Strand 8
A
231 233parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
557 562first strand
Strand 2
A
545 549anti-parallel
Strand 3
A
536 541anti-parallel
Strand 4
A
518 524anti-parallel
Strand 5
A
599 603anti-parallel
Strand 6
A
580 586anti-parallel
Strand 7
A
566 570anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 83first strand
Strand 2
B
120 126anti-parallel
Strand 3
B
69 75parallel
Strand 4
B
132 136anti-parallel
Strand 5
B
35 38parallel
Strand 6
B
171 176parallel
Strand 7
B
200 205parallel
Strand 8
B
231 233parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 83first strand
Strand 2
C
120 126anti-parallel
Strand 3
C
69 75parallel
Strand 4
C
132 136anti-parallel
Strand 5
C
33 38parallel
Strand 6
C
169 176parallel
Strand 7
C
200 205parallel
Strand 8
C
231 233parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
557 562first strand
Strand 2
C
545 549anti-parallel
Strand 3
C
536 541anti-parallel
Strand 4
C
518 524anti-parallel
Strand 5
C
599 603anti-parallel
Strand 6
C
580 586anti-parallel
Strand 7
C
566 570anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 83first strand
Strand 2
D
120 126anti-parallel
Strand 3
D
69 75parallel
Strand 4
D
132 136anti-parallel
Strand 5
D
35 38parallel
Strand 6
D
171 176parallel
Strand 7
D
200 205parallel
Strand 8
D
231 233parallel
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