Analysis of interatomic Contacts of Structural Units in PDB entry:
5A5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A5T entry

There are 8 chains in PDB entry 5A5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 7LYS 606
C
 LYS 320LYS 877
E
 TYR 4GLU 423
F
 PHE 106LEU 377
H
 GLY 29ASN 352
K
 ALA 2SER 217
L
 GLN 181LEU 553
M
 PHE 6LEU 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are150 helices in PDB entry 5A5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 21Right-handed alpha
Helix 2
2
A
23 37Right-handed alpha
Helix 3
3
A
46 63Right-handed alpha
Helix 4
4
A
66 77Right-handed alpha
Helix 5
5
A
81 117Right-handed alpha
Helix 6
6
A
118 121Right-handed 310
Helix 7
7
A
122 132Right-handed alpha
Helix 8
8
A
138 163Right-handed alpha
Helix 9
9
A
166 172Right-handed alpha
Helix 10
10
A
172 188Right-handed alpha
Helix 11
11
A
189 209Right-handed alpha
Helix 12
12
A
215 219Right-handed 310
Helix 13
13
A
220 239Right-handed alpha
Helix 14
14
A
241 264Right-handed alpha
Helix 15
15
A
266 288Right-handed alpha
Helix 16
16
A
288 311Right-handed alpha
Helix 17
17
A
314 329Right-handed alpha
Helix 18
18
A
337 343Right-handed alpha
Helix 19
19
A
344 360Right-handed alpha
Helix 20
20
A
366 377Right-handed alpha
Helix 21
21
A
378 383Right-handed alpha
Helix 22
22
A
384 396Right-handed alpha
Helix 23
23
A
402 414Right-handed alpha
Helix 24
24
A
421 447Right-handed alpha
Helix 25
25
A
452 459Right-handed alpha
Helix 26
26
A
463 478Right-handed alpha
Helix 27
27
A
500 505Right-handed alpha
Helix 28
28
A
522 538Right-handed alpha
Helix 29
29
A
540 602Right-handed alpha
Helix 30
30
C
326 341Right-handed alpha
Helix 31
31
C
346 361Right-handed alpha
Helix 32
32
C
365 386Right-handed alpha
Helix 33
33
C
387 389Right-handed 310
Helix 34
34
C
394 415Right-handed alpha
Helix 35
35
C
436 462Right-handed alpha
Helix 36
36
C
466 488Right-handed alpha
Helix 37
37
C
491 509Right-handed alpha
Helix 38
38
C
514 524Right-handed alpha
Helix 39
39
C
534 556Right-handed alpha
Helix 40
40
C
561 580Right-handed alpha
Helix 41
41
C
581 593Right-handed alpha
Helix 42
42
C
594 600Right-handed alpha
Helix 43
43
C
601 623Right-handed alpha
Helix 44
44
C
625 633Right-handed alpha
Helix 45
45
C
633 638Right-handed alpha
Helix 46
46
C
641 646Right-handed alpha
Helix 47
47
C
659 667Right-handed alpha
Helix 48
48
C
672 676Right-handed 310
Helix 49
49
C
678 703Right-handed alpha
Helix 50
50
C
713 723Right-handed alpha
Helix 51
51
C
732 747Right-handed alpha
Helix 52
52
C
748 763Right-handed alpha
Helix 53
53
C
771 796Right-handed alpha
Helix 54
54
C
804 811Right-handed alpha
Helix 55
55
C
814 830Right-handed alpha
Helix 56
56
C
849 876Right-handed alpha
Helix 57
57
E
4 14Right-handed alpha
Helix 58
58
E
32 46Right-handed alpha
Helix 59
59
E
51 60Right-handed alpha
Helix 60
60
E
64 70Right-handed alpha
Helix 61
61
E
76 88Right-handed alpha
Helix 62
62
E
95 122Right-handed alpha
Helix 63
63
E
123 141Right-handed alpha
Helix 64
64
E
144 155Right-handed alpha
Helix 65
65
E
160 180Right-handed alpha
Helix 66
66
E
181 196Right-handed alpha
Helix 67
67
E
203 220Right-handed alpha
Helix 68
68
E
224 235Right-handed alpha
Helix 69
69
E
252 263Right-handed alpha
Helix 70
70
E
269 277Right-handed alpha
Helix 71
71
E
280 288Right-handed alpha
Helix 72
72
E
290 303Right-handed alpha
Helix 73
73
E
307 320Right-handed alpha
Helix 74
74
E
328 346Right-handed alpha
Helix 75
75
E
353 361Right-handed alpha
Helix 76
76
E
363 377Right-handed alpha
Helix 77
77
E
400 420Right-handed alpha
Helix 78
78
F
115 128Right-handed alpha
Helix 79
79
F
169 184Right-handed alpha
Helix 80
80
F
202 212Right-handed alpha
Helix 81
81
F
262 278Right-handed alpha
Helix 82
82
F
284 314Right-handed alpha
Helix 83
83
F
317 320Right-handed 310
Helix 84
84
F
321 335Right-handed alpha
Helix 85
85
F
340 375Right-handed alpha
Helix 86
86
H
42 52Right-handed alpha
Helix 87
87
H
96 111Right-handed alpha
Helix 88
88
H
130 144Right-handed alpha
Helix 89
89
H
154 158Right-handed 310
Helix 90
90
H
170 176Right-handed alpha
Helix 91
91
H
185 190Right-handed alpha
Helix 92
92
H
211 219Right-handed alpha
Helix 93
93
H
225 243Right-handed alpha
Helix 94
94
H
244 276Right-handed alpha
Helix 95
95
H
276 290Right-handed alpha
Helix 96
96
H
298 304Right-handed alpha
Helix 97
97
H
314 351Right-handed alpha
Helix 98
98
K
2 15Right-handed alpha
Helix 99
99
K
18 22Right-handed 310
Helix 100
100
K
22 24Right-handed 310
Helix 101
101
K
25 39Right-handed alpha
Helix 102
102
K
43 57Right-handed alpha
Helix 103
103
K
58 61Right-handed 310
Helix 104
104
K
62 76Right-handed alpha
Helix 105
105
K
80 89Right-handed alpha
Helix 106
106
K
90 95Right-handed alpha
Helix 107
107
K
98 111Right-handed alpha
Helix 108
108
K
113 120Right-handed alpha
Helix 109
109
K
125 130Right-handed alpha
Helix 110
110
K
133 150Right-handed alpha
Helix 111
111
K
154 163Right-handed alpha
Helix 112
112
K
166 175Right-handed alpha
Helix 113
113
K
205 214Right-handed alpha
Helix 114
114
L
182 205Right-handed alpha
Helix 115
115
L
208 218Right-handed alpha
Helix 116
116
L
223 247Right-handed alpha
Helix 117
117
L
252 260Right-handed alpha
Helix 118
118
L
260 268Right-handed alpha
Helix 119
119
L
274 290Right-handed alpha
Helix 120
120
L
295 302Right-handed alpha
Helix 121
121
L
308 326Right-handed alpha
Helix 122
122
L
328 342Right-handed alpha
Helix 123
123
L
356 376Right-handed alpha
Helix 124
124
L
387 402Right-handed alpha
Helix 125
125
L
405 421Right-handed alpha
Helix 126
126
L
436 461Right-handed alpha
Helix 127
127
L
472 483Right-handed alpha
Helix 128
128
L
489 499Right-handed alpha
Helix 129
129
L
524 549Right-handed alpha
Helix 130
130
M
14 24Right-handed alpha
Helix 131
131
M
27 39Right-handed alpha
Helix 132
132
M
44 54Right-handed alpha
Helix 133
133
M
62 73Right-handed alpha
Helix 134
134
M
78 84Right-handed alpha
Helix 135
135
M
86 94Right-handed alpha
Helix 136
136
M
96 107Right-handed alpha
Helix 137
137
M
117 131Right-handed alpha
Helix 138
138
M
132 148Right-handed alpha
Helix 139
139
M
154 172Right-handed alpha
Helix 140
140
M
174 192Right-handed alpha
Helix 141
141
M
196 214Right-handed alpha
Helix 142
142
M
220 226Right-handed alpha
Helix 143
143
M
227 231Right-handed 310
Helix 144
144
M
239 249Right-handed alpha
Helix 145
145
M
251 259Right-handed alpha
Helix 146
146
M
260 267Right-handed alpha
Helix 147
147
M
268 289Right-handed alpha
Helix 148
148
M
293 302Right-handed alpha
Helix 149
149
M
304 319Right-handed alpha
Helix 150
150
M
341 367Right-handed alpha
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There are 9 sheets in PDB entry 5A5T. Click on sheet of interest to get list of strands forming it: AA, CA, EA, FA, FB, HA, HB, KA, LA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 451first strand
Strand 2
A
490 492anti-parallel
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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
801 803first strand
Strand 2
C
841 843anti-parallel
Strand 3
C
834 836anti-parallel
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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
350 352first strand
Strand 2
E
390 392anti-parallel
Strand 3
E
383 384anti-parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
111 114first strand
Strand 2
F
251 259parallel
Strand 3
F
233 239anti-parallel
Strand 4
F
219 222anti-parallel
Strand 5
F
188 195parallel
Strand 6
F
137 145anti-parallel
Strand 7
F
148 156anti-parallel
Strand 8
F
111 114parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
159 162first strand
Strand 2
F
165 168anti-parallel
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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
38 41first strand
Strand 2
H
75 83parallel
Strand 3
H
65 71anti-parallel
Strand 4
H
116 121anti-parallel
Strand 5
H
148 152parallel
Strand 6
H
164 167anti-parallel
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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
87 88first strand
Strand 2
H
92 93anti-parallel
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There are 3 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
152 153first strand
Strand 2
K
187 188anti-parallel
Strand 3
K
180 181anti-parallel
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There are 3 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
469 471first strand
Strand 2
L
512 515anti-parallel
Strand 3
L
504 506anti-parallel
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