Analysis of interatomic Contacts of Structural Units in PDB entry:
5A69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A69 entry

There is 1 chain in PDB entry 5A69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3THR 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5A69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 18Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
57 69Right-handed alpha
Helix 4
4
A
99 114Right-handed alpha
Helix 5
5
A
142 155Right-handed alpha
Helix 6
6
A
170 175Right-handed alpha
Helix 7
7
A
178 183Right-handed alpha
Helix 8
8
A
195 211Right-handed alpha
Helix 9
9
A
230 236Right-handed alpha
Helix 10
10
A
243 259Right-handed alpha
Helix 11
11
A
312 325Right-handed alpha
Helix 12
12
A
345 362Right-handed alpha
Helix 13
13
A
381 384Right-handed 310
Helix 14
14
A
385 399Right-handed alpha
Helix 15
15
A
403 413Right-handed alpha
Helix 16
16
A
415 420Right-handed alpha
Helix 17
17
A
421 427Right-handed 310
Helix 18
18
A
439 444Right-handed alpha
Helix 19
19
A
454 458Right-handed 310
Helix 20
20
A
459 482Right-handed alpha
Helix 21
21
A
484 514Right-handed alpha
Helix 22
22
A
516 526Right-handed alpha
Helix 23
23
A
526 550Right-handed alpha
Helix 24
24
A
554 581Right-handed alpha
Helix 25
25
A
587 592Right-handed 310
Helix 26
26
A
613 619Right-handed alpha
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There are 3 sheets in PDB entry 5A69. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
28 33parallel
Strand 3
A
47 52parallel
Strand 4
A
39 44anti-parallel
Strand 5
A
75 79anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 91first strand
Strand 2
A
367 372parallel
Strand 3
A
330 335parallel
Strand 4
A
301 306parallel
Strand 5
A
262 266parallel
Strand 6
A
216 218parallel
Strand 7
A
159 163parallel
Strand 8
A
117 121parallel
Strand 9
A
85 91parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
190 191anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il