Analysis of interatomic Contacts of Structural Units in PDB entry:
5A6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A6N entry

There are 2 chains in PDB entry 5A6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 8ILE 278
B
 SER 7ILE 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5A6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 11Right-handed 310
Helix 2
2
A
57 71Right-handed alpha
Helix 3
3
A
100 106Right-handed alpha
Helix 4
4
A
112 133Right-handed alpha
Helix 5
5
A
141 143Right-handed 310
Helix 6
6
A
170 176Right-handed alpha
Helix 7
7
A
177 179Right-handed 310
Helix 8
8
A
185 190Right-handed alpha
Helix 9
9
A
196 213Right-handed alpha
Helix 10
10
A
221 232Right-handed alpha
Helix 11
11
A
237 242Right-handed alpha
Helix 12
12
A
245 254Right-handed alpha
Helix 13
13
A
259 263Right-handed 310
Helix 14
14
A
265 272Right-handed alpha
Helix 15
15
A
272 277Right-handed alpha
Helix 16
16
B
8 12Right-handed alpha
Helix 17
17
B
57 71Right-handed alpha
Helix 18
18
B
100 107Right-handed alpha
Helix 19
19
B
112 133Right-handed alpha
Helix 20
20
B
141 143Right-handed 310
Helix 21
21
B
185 190Right-handed alpha
Helix 22
22
B
196 213Right-handed alpha
Helix 23
23
B
221 232Right-handed alpha
Helix 24
24
B
245 256Right-handed alpha
Helix 25
25
B
259 263Right-handed 310
Helix 26
26
B
265 272Right-handed alpha
Helix 27
27
B
272 277Right-handed alpha
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There are 6 sheets in PDB entry 5A6N. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 22first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
38 45anti-parallel
Strand 4
A
88 94anti-parallel
Strand 5
A
79 84anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
166 167anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
157 159anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 22first strand
Strand 2
B
25 32anti-parallel
Strand 3
B
38 45anti-parallel
Strand 4
B
88 94anti-parallel
Strand 5
B
79 84anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
166 167anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
157 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il