Analysis of interatomic Contacts of Structural Units in PDB entry:
5A6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A6P entry

There are 2 chains in PDB entry 5A6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 186SER 258
B
 GLY 184SER 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5A6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
201 212Right-handed alpha
Helix 2
2
A
237 249Right-handed alpha
Helix 3
3
B
201 212Right-handed alpha
Helix 4
4
B
237 249Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5A6P.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 258first strand
Strand 2
A
189 195anti-parallel
Strand 3
A
228 233anti-parallel
Strand 4
A
216 222anti-parallel
Strand 5
B
216 222anti-parallel
Strand 6
B
228 234anti-parallel
Strand 7
B
188 195anti-parallel
Strand 8
B
252 258anti-parallel
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