Analysis of interatomic Contacts of Structural Units in PDB entry:
5A6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A6U entry

There are 3 chains in PDB entry 5A6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 26GLU 467
B
 GLU 61SER 96
G
 PHE 7GLY 68
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5A6U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 46Right-handed alpha
Helix 2
AA2
A
63 69Right-handed alpha
Helix 3
AA3
A
81 97Right-handed alpha
Helix 4
AA4
A
105 133Right-handed alpha
Helix 5
AA5
A
149 166Right-handed alpha
Helix 6
AA6
A
177 193Right-handed alpha
Helix 7
AA7
A
215 223Right-handed alpha
Helix 8
AA8
A
224 226Right-handed 310
Helix 9
AA9
A
240 260Right-handed alpha
Helix 10
AB1
A
285 287Right-handed 310
Helix 11
AB2
A
288 304Right-handed alpha
Helix 12
AB3
A
304 312Right-handed alpha
Helix 13
AB4
A
338 344Right-handed alpha
Helix 14
AB5
A
359 383Right-handed alpha
Helix 15
AB6
A
386 397Right-handed alpha
Helix 16
AB7
A
406 433Right-handed alpha
Helix 17
AB8
A
444 466Right-handed alpha
Helix 18
AB9
B
69 86Right-handed alpha
Helix 19
AC1
G
9 20Right-handed alpha
Helix 20
AC2
G
29 47Right-handed alpha
Helix 21
AC3
G
49 54Right-handed alpha
Helix 22
AC4
G
54 63Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5A6U.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 268first strand
Strand 2
A
276 281anti-parallel
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