Analysis of interatomic Contacts of Structural Units in PDB entry:
5A7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A7E entry

There is 1 chain in PDB entry 5A7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLN 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5A7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
72 76Right-handed 310
Helix 2
AA2
A
113 118Right-handed 310
Helix 3
AA3
A
132 136Right-handed 310
Helix 4
AA4
A
140 142Right-handed 310
Helix 5
AA5
A
268 272Right-handed 310
Helix 6
AA6
A
299 303Right-handed 310
Helix 7
AA7
A
348 355Right-handed alpha
Helix 8
AA8
A
359 363Right-handed 310
Helix 9
AA9
A
451 457Right-handed alpha
Helix 10
AB1
A
469 474Right-handed alpha
Helix 11
AB2
A
477 482Right-handed alpha
Helix 12
AB3
A
482 489Right-handed alpha
Helix 13
AB4
A
491 495Right-handed 310
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There are 7 sheets in PDB entry 5A7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 26first strand
Strand 2
A
4 14anti-parallel
Strand 3
A
42 49parallel
Strand 4
A
91 97anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
120 126parallel
Strand 3
A
103 109anti-parallel
Strand 4
A
62 65anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
144 150anti-parallel
Strand 3
A
193 200parallel
Strand 4
A
241 247anti-parallel
Strand 5
A
216 221anti-parallel
Strand 6
A
224 231anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
274 279parallel
Strand 3
A
254 261anti-parallel
Strand 4
A
207 211anti-parallel
Strand 5
A
234 236anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
377 383parallel
Strand 3
A
432 438anti-parallel
Strand 4
A
402 406anti-parallel
Strand 5
A
420 421anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 331first strand
Strand 2
A
334 337anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 372first strand
Strand 2
A
460 465parallel
Strand 3
A
443 449anti-parallel
Strand 4
A
394 397anti-parallel
Strand 5
A
423 425anti-parallel
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