Analysis of interatomic Contacts of Structural Units in PDB entry:
5A7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A7F entry

There is 1 chain in PDB entry 5A7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21LYS 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5A7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 64Right-handed 310
Helix 2
2
A
90 102Right-handed alpha
Helix 3
3
A
154 162Right-handed alpha
Helix 4
4
A
172 178Right-handed alpha
Helix 5
5
A
188 205Right-handed alpha
Helix 6
6
A
206 208Right-handed 310
Helix 7
7
A
221 232Right-handed alpha
Helix 8
8
A
233 237Right-handed 310
Helix 9
9
A
252 254Right-handed 310
Helix 10
10
A
261 273Right-handed alpha
Helix 11
11
A
278 289Right-handed alpha
Helix 12
12
A
290 302Right-handed alpha
Helix 13
13
A
311 315Right-handed 310
Helix 14
14
A
331 338Right-handed alpha
Helix 15
15
A
357 363Right-handed alpha
Helix 16
16
A
373 384Right-handed alpha
Helix 17
17
A
384 389Right-handed alpha
Helix 18
18
A
391 393Right-handed 310
Helix 19
19
A
394 404Right-handed alpha
Helix 20
20
A
408 425Right-handed alpha
Helix 21
21
A
425 439Right-handed alpha
Helix 22
22
A
470 475Right-handed alpha
Helix 23
23
A
476 481Right-handed alpha
Helix 24
24
A
485 506Right-handed alpha
Helix 25
25
A
539 551Right-handed alpha
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There are 4 sheets in PDB entry 5A7F. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
31 34anti-parallel
Strand 3
A
77 79parallel
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There are 11 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
118 123anti-parallel
Strand 4
A
164 168anti-parallel
Strand 5
A
133 139parallel
Strand 6
A
210 220parallel
Strand 7
A
242 246parallel
Strand 8
A
346 351parallel
Strand 9
A
443 449parallel
Strand 10
A
524 529parallel
Strand 11
A
533 536anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
112 113parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 257first strand
Strand 2
A
321 322parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il