Analysis of interatomic Contacts of Structural Units in PDB entry:
5A7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A7M entry

There are 2 chains in PDB entry 5A7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2GLU 766
B
 ASN 2GLU 766
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 5A7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 23Right-handed alpha
Helix 2
2
A
40 44Right-handed 310
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
61 68Right-handed alpha
Helix 5
5
A
77 80Right-handed 310
Helix 6
6
A
114 121Right-handed alpha
Helix 7
7
A
123 144Right-handed alpha
Helix 8
8
A
166 170Right-handed 310
Helix 9
9
A
177 192Right-handed alpha
Helix 10
10
A
215 219Right-handed 310
Helix 11
11
A
220 223Right-handed 310
Helix 12
12
A
229 236Right-handed alpha
Helix 13
13
A
238 247Right-handed alpha
Helix 14
14
A
268 273Right-handed alpha
Helix 15
15
A
274 280Right-handed alpha
Helix 16
16
A
293 300Right-handed alpha
Helix 17
17
A
307 319Right-handed alpha
Helix 18
18
A
326 338Right-handed alpha
Helix 19
19
A
342 360Right-handed alpha
Helix 20
20
A
373 383Right-handed alpha
Helix 21
21
A
384 394Right-handed alpha
Helix 22
22
A
422 427Right-handed 310
Helix 23
23
A
438 446Right-handed alpha
Helix 24
24
A
465 476Right-handed alpha
Helix 25
25
A
504 514Right-handed alpha
Helix 26
26
A
531 536Right-handed alpha
Helix 27
27
A
552 562Right-handed alpha
Helix 28
28
A
579 584Right-handed alpha
Helix 29
29
A
601 606Right-handed alpha
Helix 30
30
A
638 642Right-handed alpha
Helix 31
31
A
651 654Right-handed 310
Helix 32
32
A
718 722Right-handed alpha
Helix 33
33
B
18 23Right-handed alpha
Helix 34
34
B
40 44Right-handed 310
Helix 35
35
B
48 58Right-handed alpha
Helix 36
36
B
61 68Right-handed alpha
Helix 37
37
B
77 80Right-handed 310
Helix 38
38
B
114 121Right-handed alpha
Helix 39
39
B
123 143Right-handed alpha
Helix 40
40
B
166 170Right-handed 310
Helix 41
41
B
177 192Right-handed alpha
Helix 42
42
B
215 219Right-handed 310
Helix 43
43
B
220 223Right-handed 310
Helix 44
44
B
229 236Right-handed alpha
Helix 45
45
B
238 247Right-handed alpha
Helix 46
46
B
268 273Right-handed alpha
Helix 47
47
B
274 280Right-handed alpha
Helix 48
48
B
293 300Right-handed alpha
Helix 49
49
B
307 319Right-handed alpha
Helix 50
50
B
326 338Right-handed alpha
Helix 51
51
B
342 360Right-handed alpha
Helix 52
52
B
373 383Right-handed alpha
Helix 53
53
B
384 394Right-handed alpha
Helix 54
54
B
422 427Right-handed 310
Helix 55
55
B
438 446Right-handed alpha
Helix 56
56
B
465 475Right-handed alpha
Helix 57
57
B
504 513Right-handed alpha
Helix 58
58
B
531 536Right-handed alpha
Helix 59
59
B
552 562Right-handed alpha
Helix 60
60
B
579 584Right-handed alpha
Helix 61
61
B
601 606Right-handed alpha
Helix 62
62
B
638 644Right-handed alpha
Helix 63
63
B
651 654Right-handed 310
Helix 64
64
B
718 722Right-handed alpha
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There are 14 sheets in PDB entry 5A7M. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
84 85anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
202 208parallel
Strand 3
A
252 255parallel
Strand 4
A
287 290parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
259 260parallel
Strand 3
A
263 264anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 398first strand
Strand 2
A
542 547anti-parallel
Strand 3
A
519 524parallel
Strand 4
A
478 484parallel
Strand 5
A
411 415parallel
Strand 6
A
449 453parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 627first strand
Strand 2
A
656 666anti-parallel
Strand 3
A
709 717anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 637first strand
Strand 2
A
748 754parallel
Strand 3
A
735 741anti-parallel
Strand 4
A
672 682anti-parallel
Strand 5
A
694 704anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 724first strand
Strand 2
A
730 732anti-parallel
Strand 3
A
758 761anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
84 85anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 151first strand
Strand 2
B
202 208parallel
Strand 3
B
252 255parallel
Strand 4
B
287 290parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 226first strand
Strand 2
B
259 260parallel
Strand 3
B
263 264anti-parallel
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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
395 399first strand
Strand 2
B
542 547anti-parallel
Strand 3
B
519 524parallel
Strand 4
B
478 484parallel
Strand 5
B
411 415parallel
Strand 6
B
449 453parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
623 629first strand
Strand 2
B
656 666anti-parallel
Strand 3
B
709 717anti-parallel
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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
635 637first strand
Strand 2
B
748 754parallel
Strand 3
B
735 741anti-parallel
Strand 4
B
672 682anti-parallel
Strand 5
B
694 704anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
723 724first strand
Strand 2
B
730 732anti-parallel
Strand 3
B
758 761anti-parallel
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